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Items: 1 to 20 of 78

1.

Patterns of cis-element enrichment reveal potential regulatory modules involved in the transcriptional regulation of anoxia response of japonica rice.

Mohanty B, Herath V, Wijaya E, Yeo HC, de Los Reyes BG, Lee DY.

Gene. 2012 Dec 15;511(2):235-42. doi: 10.1016/j.gene.2012.09.048. Epub 2012 Sep 23.

PMID:
23010196
2.

Comparative analysis of anoxic coleoptile elongation in rice varieties: relationship between coleoptile length and carbohydrate levels, fermentative metabolism and anaerobic gene expression.

Magneschi L, Kudahettige RL, Alpi A, Perata P.

Plant Biol (Stuttg). 2009 Jul;11(4):561-73. doi: 10.1111/j.1438-8677.2008.00150.x.

PMID:
19538394
3.

In silico analysis of cis-acting regulatory elements in 5' regulatory regions of sucrose transporter gene families in rice (Oryza sativa Japonica) and Arabidopsis thaliana.

Ibraheem O, Botha CE, Bradley G.

Comput Biol Chem. 2010 Dec;34(5-6):268-83. doi: 10.1016/j.compbiolchem.2010.09.003. Epub 2010 Oct 30.

PMID:
21036669
4.

Comparative analysis of drought-responsive transcriptome in Indica rice genotypes with contrasting drought tolerance.

Lenka SK, Katiyar A, Chinnusamy V, Bansal KC.

Plant Biotechnol J. 2011 Apr;9(3):315-27. doi: 10.1111/j.1467-7652.2010.00560.x. Epub 2010 Aug 31.

5.

Supra-optimal expression of the cold-regulated OsMyb4 transcription factor in transgenic rice changes the complexity of transcriptional network with major effects on stress tolerance and panicle development.

Park MR, Yun KY, Mohanty B, Herath V, Xu F, Wijaya E, Bajic VB, Yun SJ, De Los Reyes BG.

Plant Cell Environ. 2010 Dec;33(12):2209-30. doi: 10.1111/j.1365-3040.2010.02221.x. Epub 2010 Sep 28.

6.

Three cis-elements required for rice alpha-amylase Amy3D expression during sugar starvation.

Hwang YS, Karrer EE, Thomas BR, Chen L, Rodriguez RL.

Plant Mol Biol. 1998 Feb;36(3):331-41.

PMID:
9484474
7.

The auxin responsive AP2/ERF transcription factor CROWN ROOTLESS5 is involved in crown root initiation in rice through the induction of OsRR1, a type-A response regulator of cytokinin signaling.

Kitomi Y, Ito H, Hobo T, Aya K, Kitano H, Inukai Y.

Plant J. 2011 Aug;67(3):472-84. doi: 10.1111/j.1365-313X.2011.04610.x. Epub 2011 May 31.

8.

Metabolic and transcriptional regulatory mechanisms underlying the anoxic adaptation of rice coleoptile.

Lakshmanan M, Mohanty B, Lim SH, Ha SH, Lee DY.

AoB Plants. 2014 Jun 3;6. pii: plu026. doi: 10.1093/aobpla/plu026.

9.
10.

Genome-wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa).

Wang D, Pei K, Fu Y, Sun Z, Li S, Liu H, Tang K, Han B, Tao Y.

Gene. 2007 Jun 1;394(1-2):13-24. Epub 2007 Jan 26.

PMID:
17408882
11.

Transcriptional profiling of genes responsive to abscisic acid and gibberellin in rice: phenotyping and comparative analysis between rice and Arabidopsis.

Yazaki J, Shimatani Z, Hashimoto A, Nagata Y, Fujii F, Kojima K, Suzuki K, Taya T, Tonouchi M, Nelson C, Nakagawa A, Otomo Y, Murakami K, Matsubara K, Kawai J, Carninci P, Hayashizaki Y, Kikuchi S.

Physiol Genomics. 2004 Apr 13;17(2):87-100.

PMID:
14982972
12.
13.

Transcriptomic adaptations in rice suspension cells under sucrose starvation.

Wang HJ, Wan AR, Hsu CM, Lee KW, Yu SM, Jauh GY.

Plant Mol Biol. 2007 Mar;63(4):441-63.

PMID:
17115300
14.

Overexpression of an ERF transcription factor TSRF1 improves rice drought tolerance.

Quan R, Hu S, Zhang Z, Zhang H, Zhang Z, Huang R.

Plant Biotechnol J. 2010 May 1;8(4):476-88. doi: 10.1111/j.1467-7652.2009.00492.x. Epub 2010 Mar 11.

15.

Transcript profiling of the anoxic rice coleoptile.

Lasanthi-Kudahettige R, Magneschi L, Loreti E, Gonzali S, Licausi F, Novi G, Beretta O, Vitulli F, Alpi A, Perata P.

Plant Physiol. 2007 May;144(1):218-31. Epub 2007 Mar 16.

16.

A comprehensive transcriptional profiling of the WRKY gene family in rice under various abiotic and phytohormone treatments.

Ramamoorthy R, Jiang SY, Kumar N, Venkatesh PN, Ramachandran S.

Plant Cell Physiol. 2008 Jun;49(6):865-79. doi: 10.1093/pcp/pcn061. Epub 2008 Apr 15.

PMID:
18413358
17.

Unraveling transcriptional control in Arabidopsis using cis-regulatory elements and coexpression networks.

Vandepoele K, Quimbaya M, Casneuf T, De Veylder L, Van de Peer Y.

Plant Physiol. 2009 Jun;150(2):535-46. doi: 10.1104/pp.109.136028. Epub 2009 Apr 8.

18.

Transcriptional profiling and in silico analysis of Dof transcription factor gene family for understanding their regulation during seed development of rice Oryza sativa L.

Gaur VS, Singh US, Kumar A.

Mol Biol Rep. 2011 Apr;38(4):2827-48. doi: 10.1007/s11033-010-0429-z. Epub 2010 Nov 27.

PMID:
21113680
19.

Expansin gene expression and anoxic coleoptile elongation in rice cultivars.

Magneschi L, Kudahettige RL, Alpi A, Perata P.

J Plant Physiol. 2009 Sep 15;166(14):1576-80. doi: 10.1016/j.jplph.2009.03.008. Epub 2009 May 1.

PMID:
19410334
20.

mRNA accumulation and promoter activity of the gene coding for a hydroxyproline-rich glycoprotein in Oryza sativa.

Guo Y, Delseny M, Puigdomènech P.

Plant Mol Biol. 1994 May;25(2):159-65.

PMID:
8018866

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