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Items: 1 to 20 of 106

1.

Populated intermediates in the thermal unfolding of the human telomeric quadruplex.

Gray RD, Buscaglia R, Chaires JB.

J Am Chem Soc. 2012 Oct 10;134(40):16834-44. doi: 10.1021/ja307543z. Epub 2012 Sep 27.

2.

Folding and unfolding pathways of the human telomeric G-quadruplex.

Gray RD, Trent JO, Chaires JB.

J Mol Biol. 2014 Apr 17;426(8):1629-50. doi: 10.1016/j.jmb.2014.01.009. Epub 2014 Jan 31.

3.

Thermodynamic characterization of human telomere quadruplex unfolding.

Buscaglia R, Gray RD, Chaires JB.

Biopolymers. 2013 Dec;99(12):1006-18. doi: 10.1002/bip.22247.

4.

Characterization of a K+-induced conformational switch in a human telomeric DNA oligonucleotide using 2-aminopurine fluorescence.

Gray RD, Petraccone L, Trent JO, Chaires JB.

Biochemistry. 2010 Jan 12;49(1):179-94. doi: 10.1021/bi901357r.

5.

Energetic basis of human telomeric DNA folding into G-quadruplex structures.

BonĨina M, Lah J, Prislan I, Vesnaver G.

J Am Chem Soc. 2012 Jun 13;134(23):9657-63. doi: 10.1021/ja300605n. Epub 2012 Jun 1.

PMID:
22594380
6.

Kinetics of unfolding the human telomeric DNA quadruplex using a PNA trap.

Green JJ, Ying L, Klenerman D, Balasubramanian S.

J Am Chem Soc. 2003 Apr 2;125(13):3763-7.

PMID:
12656607
7.
8.

Effect of cationic comb-type copolymer on quadruplex folding of human telomeric DNA.

Makita N, Choi SW, Kano A, Yamayoshi A, Akaike T, Maruyama A.

Nucleosides Nucleotides Nucleic Acids. 2007;26(8-9):1115-9.

PMID:
18058548
9.

Analysis of multidimensional G-quadruplex melting curves.

Gray RD, Chaires JB.

Curr Protoc Nucleic Acid Chem. 2011 Jun;Chapter 17:Unit17.4. doi: 10.1002/0471142700.nc1704s45.

10.

Lowering the overall charge on TMPyP4 improves its selectivity for G-quadruplex DNA.

Ruan TL, Davis SJ, Powell BM, Harbeck CP, Habdas J, Habdas P, Yatsunyk LA.

Biochimie. 2017 Jan;132:121-130. doi: 10.1016/j.biochi.2016.11.003. Epub 2016 Nov 10.

PMID:
27840085
11.

Replication protein A unfolds G-quadruplex structures with varying degrees of efficiency.

Qureshi MH, Ray S, Sewell AL, Basu S, Balci H.

J Phys Chem B. 2012 May 17;116(19):5588-94. doi: 10.1021/jp300546u. Epub 2012 May 3.

12.

Interactions of sodium and potassium ions with oligonucleotides carrying human telomeric sequence and pyrene moieties at both termini.

Hayashida H, Paczesny J, Juskowiak B, Takenaka S.

Bioorg Med Chem. 2008 Nov 15;16(22):9871-81. doi: 10.1016/j.bmc.2008.08.035. Epub 2008 Aug 26.

PMID:
18851918
13.

Studies on the structure and dynamics of the human telomeric G quadruplex by single-molecule fluorescence resonance energy transfer.

Ying L, Green JJ, Li H, Klenerman D, Balasubramanian S.

Proc Natl Acad Sci U S A. 2003 Dec 9;100(25):14629-34. Epub 2003 Nov 25.

14.

Low-energy circular dichroism of 2-aminopurine dinucleotide as a probe of local conformation of DNA and RNA.

Johnson NP, Baase WA, Von Hippel PH.

Proc Natl Acad Sci U S A. 2004 Mar 9;101(10):3426-31. Epub 2004 Mar 1.

15.
17.

Formation of an intramolecular triple-stranded DNA structure monitored by fluorescence of 2-aminopurine or 6-methylisoxanthopterin.

Shchyolkina AK, Kaluzhny DN, Borisova OF, Hawkins ME, Jernigan RL, Jovin TM, Arndt-Jovin DJ, Zhurkin VB.

Nucleic Acids Res. 2004 Jan 22;32(2):432-40. Print 2004.

18.

Sequence dependence of energy transfer in DNA oligonucleotides.

Xu DG, Nordlund TM.

Biophys J. 2000 Feb;78(2):1042-58.

19.

Spectroscopic comparison of different DNA structures formed by oligonucleotides.

Sun XG, Cao EH, He YJ, Qin JF.

J Biomol Struct Dyn. 1999 Feb;16(4):863-72.

PMID:
10217455
20.

Conformational variability of recombination R-triplex formed by the mammalian telomeric sequence.

Shchyolkina AK, Kaluzhny DN, Borisova OF, Arndt-Jovin DJ, Jovin TM, Zhurkin VB.

J Biomol Struct Dyn. 2016 Jun;34(6):1298-306. doi: 10.1080/07391102.2015.1077344. Epub 2015 Oct 15.

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