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Items: 1 to 20 of 159

1.

A comprehensive analysis of precursor microRNA cleavage by human Dicer.

Feng Y, Zhang X, Graves P, Zeng Y.

RNA. 2012 Nov;18(11):2083-92. doi: 10.1261/rna.033688.112. Epub 2012 Sep 14.

2.

TRBP alters human precursor microRNA processing in vitro.

Lee HY, Doudna JA.

RNA. 2012 Nov;18(11):2012-9. doi: 10.1261/rna.035501.112. Epub 2012 Sep 24.

3.

Substrate-specific kinetics of Dicer-catalyzed RNA processing.

Chakravarthy S, Sternberg SH, Kellenberger CA, Doudna JA.

J Mol Biol. 2010 Dec 3;404(3):392-402. doi: 10.1016/j.jmb.2010.09.030. Epub 2010 Oct 13.

4.

Short RNA duplexes guide sequence-dependent cleavage by human Dicer.

Bergeron L Jr, Perreault JP, Abou Elela S.

RNA. 2010 Dec;16(12):2464-73. doi: 10.1261/rna.2346510. Epub 2010 Oct 25.

5.

The role of human Dicer-dsRBD in processing small regulatory RNAs.

Wostenberg C, Lary JW, Sahu D, Acevedo R, Quarles KA, Cole JL, Showalter SA.

PLoS One. 2012;7(12):e51829. doi: 10.1371/journal.pone.0051829. Epub 2012 Dec 13.

6.

Two-step cleavage of hairpin RNA with 5' overhangs by human DICER.

Ando Y, Maida Y, Morinaga A, Burroughs AM, Kimura R, Chiba J, Suzuki H, Masutomi K, Hayashizaki Y.

BMC Mol Biol. 2011 Feb 9;12:6. doi: 10.1186/1471-2199-12-6.

7.

RNA editing of the microRNA-151 precursor blocks cleavage by the Dicer-TRBP complex.

Kawahara Y, Zinshteyn B, Chendrimada TP, Shiekhattar R, Nishikura K.

EMBO Rep. 2007 Aug;8(8):763-9. Epub 2007 Jun 22.

8.

Nucleotide sequence of miRNA precursor contributes to cleavage site selection by Dicer.

Starega-Roslan J, Galka-Marciniak P, Krzyzosiak WJ.

Nucleic Acids Res. 2015 Dec 15;43(22):10939-51. doi: 10.1093/nar/gkv968. Epub 2015 Sep 30.

9.

Recognition of the pre-miRNA structure by Drosophila Dicer-1.

Tsutsumi A, Kawamata T, Izumi N, Seitz H, Tomari Y.

Nat Struct Mol Biol. 2011 Sep 18;18(10):1153-8. doi: 10.1038/nsmb.2125.

PMID:
21926993
10.

PHDcleav: a SVM based method for predicting human Dicer cleavage sites using sequence and secondary structure of miRNA precursors.

Ahmed F, Kaundal R, Raghava GP.

BMC Bioinformatics. 2013;14 Suppl 14:S9. doi: 10.1186/1471-2105-14-S14-S9. Epub 2013 Oct 9.

11.

Structure of precursor microRNA's terminal loop regulates human Dicer's dicing activity by switching DExH/D domain.

Liu Z, Wang J, Li G, Wang HW.

Protein Cell. 2015 Mar;6(3):185-93. doi: 10.1007/s13238-014-0124-2. Epub 2014 Dec 31.

12.

Substrate-specific structural rearrangements of human Dicer.

Taylor DW, Ma E, Shigematsu H, Cianfrocco MA, Noland CL, Nagayama K, Nogales E, Doudna JA, Wang HW.

Nat Struct Mol Biol. 2013 Jun;20(6):662-70. doi: 10.1038/nsmb.2564. Epub 2013 Apr 28.

13.

The role of Dicer protein partners in the processing of microRNA precursors.

Koscianska E, Starega-Roslan J, Krzyzosiak WJ.

PLoS One. 2011;6(12):e28548. doi: 10.1371/journal.pone.0028548. Epub 2011 Dec 6.

14.

Inorganic phosphate blocks binding of pre-miRNA to Dicer-2 via its PAZ domain.

Fukunaga R, Colpan C, Han BW, Zamore PD.

EMBO J. 2014 Feb 18;33(4):371-84. doi: 10.1002/embj.201387176. Epub 2014 Jan 31.

15.

The role of the precursor structure in the biogenesis of microRNA.

Starega-Roslan J, Koscianska E, Kozlowski P, Krzyzosiak WJ.

Cell Mol Life Sci. 2011 Sep;68(17):2859-71. doi: 10.1007/s00018-011-0726-2. Epub 2011 May 24. Review.

16.

Dicer recognizes the 5' end of RNA for efficient and accurate processing.

Park JE, Heo I, Tian Y, Simanshu DK, Chang H, Jee D, Patel DJ, Kim VN.

Nature. 2011 Jul 13;475(7355):201-5. doi: 10.1038/nature10198.

17.

Homodimeric structure and double-stranded RNA cleavage activity of the C-terminal RNase III domain of human dicer.

Takeshita D, Zenno S, Lee WC, Nagata K, Saigo K, Tanokura M.

J Mol Biol. 2007 Nov 16;374(1):106-20. Epub 2007 Sep 8.

PMID:
17920623
18.

MCPIP1 ribonuclease antagonizes dicer and terminates microRNA biogenesis through precursor microRNA degradation.

Suzuki HI, Arase M, Matsuyama H, Choi YL, Ueno T, Mano H, Sugimoto K, Miyazono K.

Mol Cell. 2011 Nov 4;44(3):424-36. doi: 10.1016/j.molcel.2011.09.012.

19.

Differential roles of human Dicer-binding proteins TRBP and PACT in small RNA processing.

Lee HY, Zhou K, Smith AM, Noland CL, Doudna JA.

Nucleic Acids Res. 2013 Jul;41(13):6568-76. doi: 10.1093/nar/gkt361. Epub 2013 May 9.

20.

The regulatory epicenter of miRNAs.

Jha A, Mehra M, Shankar R.

J Biosci. 2011 Sep;36(4):621-38.

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