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Tissue-restricted transcription from a conserved intragenic CpG island in the Klf1 gene in mice.

Southwood CM, Lipovich L, Gow A.

Biol Reprod. 2012 Nov 1;87(5):108. doi: 10.1095/biolreprod.112.099879. Print 2012 Nov.


Conserved role of intragenic DNA methylation in regulating alternative promoters.

Maunakea AK, Nagarajan RP, Bilenky M, Ballinger TJ, D'Souza C, Fouse SD, Johnson BE, Hong C, Nielsen C, Zhao Y, Turecki G, Delaney A, Varhol R, Thiessen N, Shchors K, Heine VM, Rowitch DH, Xing X, Fiore C, Schillebeeckx M, Jones SJ, Haussler D, Marra MA, Hirst M, Wang T, Costello JF.

Nature. 2010 Jul 8;466(7303):253-7. doi: 10.1038/nature09165.


Cell type-specific DNA methylation at intragenic CpG islands in the immune system.

Deaton AM, Webb S, Kerr AR, Illingworth RS, Guy J, Andrews R, Bird A.

Genome Res. 2011 Jul;21(7):1074-86. doi: 10.1101/gr.118703.110. Epub 2011 May 31.


CpG islands in human ZFX and ZFY and mouse Zfx genes: sequence similarities and methylation differences.

Luoh SW, Jegalian K, Lee A, Chen EY, Ridley A, Page DC.

Genomics. 1995 Sep 20;29(2):353-63.


Contrasting chromatin organization of CpG islands and exons in the human genome.

Choi JK.

Genome Biol. 2010;11(7):R70. doi: 10.1186/gb-2010-11-7-r70. Epub 2010 Jul 5.


Protection of CpG islands from DNA methylation is DNA-encoded and evolutionarily conserved.

Long HK, King HW, Patient RK, Odom DT, Klose RJ.

Nucleic Acids Res. 2016 Aug 19;44(14):6693-706. doi: 10.1093/nar/gkw258. Epub 2016 Apr 15.


DNA methylation and expression patterns of key tissue-specific genes in adult stem cells and stomach tissues.

Hong SJ, Kang MI, Oh JH, Jung YC, Kim YH, Kim SJ, Choi SH, Seo EJ, Choi SW, Rhyu MG.

J Korean Med Sci. 2009 Oct;24(5):918-29. doi: 10.3346/jkms.2009.24.5.918. Epub 2009 Sep 23.


Structure and the promoter region of the mouse gene encoding the 67-kD form of glutamic acid decarboxylase.

Szabó G, Katarova Z, Körtvély E, Greenspan RJ, Urbán Z.

DNA Cell Biol. 1996 Dec;15(12):1081-91.


DNA hypomethylation at the ZNF206-exon 5 CpG island associated with neuronal differentiation in mice and development of neuroblastoma in humans.

Kawashima H, Sugito K, Yoshizawa S, Uekusa S, Furuya T, Ikeda T, Koshinaga T, Shinojima Y, Hasegawa R, Mishra R, Igarashi J, Kimura M, Wang X, Fujiwara K, Gosh S, Nagase H.

Int J Oncol. 2012 Jan;40(1):31-9. doi: 10.3892/ijo.2011.1234. Epub 2011 Oct 13.


Intergenic, gene terminal, and intragenic CpG islands in the human genome.

Medvedeva YA, Fridman MV, Oparina NJ, Malko DB, Ermakova EO, Kulakovskiy IV, Heinzel A, Makeev VJ.

BMC Genomics. 2010 Jan 19;11:48. doi: 10.1186/1471-2164-11-48.


Aberrant methylation and silencing of ARHI, an imprinted tumor suppressor gene in which the function is lost in breast cancers.

Yuan J, Luo RZ, Fujii S, Wang L, Hu W, Andreeff M, Pan Y, Kadota M, Oshimura M, Sahin AA, Issa JP, Bast RC Jr, Yu Y.

Cancer Res. 2003 Jul 15;63(14):4174-80.


DNA methylation analysis of the mammalian PEG3 imprinted domain.

Huang JM, Kim J.

Gene. 2009 Aug 1;442(1-2):18-25. doi: 10.1016/j.gene.2009.04.016. Epub 2009 May 3.


Identification of genetic and epigenetic similarities of SPHK1/Sphk1 in mammals.

Imamura T, Miyauchi-Senda N, Tanaka S, Shiota K.

J Vet Med Sci. 2004 Nov;66(11):1387-93.


Transcripts and CpG islands associated with the pro-opiomelanocortin gene and other neurally expressed genes.

Gardiner-Garden M, Frommer M.

J Mol Endocrinol. 1994 Jun;12(3):365-82.


Regulation of Pdha-2 expression is mediated by proximal promoter sequences and CpG methylation.

Iannello RC, Young J, Sumarsono S, Tymms MJ, Dahl HH, Gould J, Hedger M, Kola I.

Mol Cell Biol. 1997 Feb;17(2):612-9.


CpG island clusters and pro-epigenetic selection for CpGs in protein-coding exons of HOX and other transcription factors.

Branciamore S, Chen ZX, Riggs AD, Rodin SN.

Proc Natl Acad Sci U S A. 2010 Aug 31;107(35):15485-90. doi: 10.1073/pnas.1010506107. Epub 2010 Aug 17.

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