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Items: 1 to 20 of 95

1.

Dynamic regulation of HIV-1 mRNA populations analyzed by single-molecule enrichment and long-read sequencing.

Ocwieja KE, Sherrill-Mix S, Mukherjee R, Custers-Allen R, David P, Brown M, Wang S, Link DR, Olson J, Travers K, Schadt E, Bushman FD.

Nucleic Acids Res. 2012 Nov 1;40(20):10345-55. doi: 10.1093/nar/gks753. Epub 2012 Aug 25.

2.

Negative and positive mRNA splicing elements act competitively to regulate human immunodeficiency virus type 1 vif gene expression.

Exline CM, Feng Z, Stoltzfus CM.

J Virol. 2008 Apr;82(8):3921-31. doi: 10.1128/JVI.01558-07. Epub 2008 Feb 13.

3.

Excessive RNA splicing and inhibition of HIV-1 replication induced by modified U1 small nuclear RNAs.

Mandal D, Feng Z, Stoltzfus CM.

J Virol. 2010 Dec;84(24):12790-800. doi: 10.1128/JVI.01257-10. Epub 2010 Oct 6.

4.

Chapter 1. Regulation of HIV-1 alternative RNA splicing and its role in virus replication.

Stoltzfus CM.

Adv Virus Res. 2009;74:1-40. doi: 10.1016/S0065-3527(09)74001-1. Review.

PMID:
19698894
5.

Next-generation sequencing reveals HIV-1-mediated suppression of T cell activation and RNA processing and regulation of noncoding RNA expression in a CD4+ T cell line.

Chang ST, Sova P, Peng X, Weiss J, Law GL, Palermo RE, Katze MG.

MBio. 2011 Sep 20;2(5). pii: e00134-11. doi: 10.1128/mBio.00134-11. Print 2011.

7.

Identification of new splice sites used for generation of rev transcripts in human immunodeficiency virus type 1 subtype C primary isolates.

Delgado E, Carrera C, Nebreda P, Fernández-García A, Pinilla M, García V, Pérez-Álvarez L, Thomson MM.

PLoS One. 2012;7(2):e30574. doi: 10.1371/journal.pone.0030574. Epub 2012 Feb 17.

8.

A novel splice donor site in the gag-pol gene is required for HIV-1 RNA stability.

Lützelberger M, Reinert LS, Das AT, Berkhout B, Kjems J.

J Biol Chem. 2006 Jul 7;281(27):18644-51. Epub 2006 May 4.

9.

Characterizing HIV-1 Splicing by Using Next-Generation Sequencing.

Emery A, Zhou S, Pollom E, Swanstrom R.

J Virol. 2017 Feb 28;91(6). pii: e02515-16. doi: 10.1128/JVI.02515-16. Print 2017 Mar 15.

PMID:
28077653
10.
11.

HIV-1 infection induces changes in expression of cellular splicing factors that regulate alternative viral splicing and virus production in macrophages.

Dowling D, Nasr-Esfahani S, Tan CH, O'Brien K, Howard JL, Jans DA, Purcell DF, Stoltzfus CM, Sonza S.

Retrovirology. 2008 Feb 4;5:18. doi: 10.1186/1742-4690-5-18.

12.

Roles of viral and cellular proteins in the expression of alternatively spliced HTLV-1 pX mRNAs.

Princler GL, Julias JG, Hughes SH, Derse D.

Virology. 2003 Dec 5;317(1):136-45.

13.

HIV-1 splicing at the major splice donor site is restricted by RNA structure.

Mueller N, van Bel N, Berkhout B, Das AT.

Virology. 2014 Nov;468-470:609-20. doi: 10.1016/j.virol.2014.09.018. Epub 2014 Oct 8.

15.

Dual effect of the SR proteins ASF/SF2, SC35 and 9G8 on HIV-1 RNA splicing and virion production.

Jacquenet S, Decimo D, Muriaux D, Darlix JL.

Retrovirology. 2005 May 22;2:33.

16.

Analysis of human immunodeficiency virus type 1 gene expression in latently infected resting CD4+ T lymphocytes in vivo.

Hermankova M, Siliciano JD, Zhou Y, Monie D, Chadwick K, Margolick JB, Quinn TC, Siliciano RF.

J Virol. 2003 Jul;77(13):7383-92.

19.

A Janus splicing regulatory element modulates HIV-1 tat and rev mRNA production by coordination of hnRNP A1 cooperative binding.

Marchand V, Méreau A, Jacquenet S, Thomas D, Mougin A, Gattoni R, Stévenin J, Branlant C.

J Mol Biol. 2002 Nov 1;323(4):629-52.

PMID:
12419255
20.

Cartography of neurexin alternative splicing mapped by single-molecule long-read mRNA sequencing.

Treutlein B, Gokce O, Quake SR, Südhof TC.

Proc Natl Acad Sci U S A. 2014 Apr 1;111(13):E1291-9. doi: 10.1073/pnas.1403244111. Epub 2014 Mar 17.

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