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Items: 1 to 20 of 85

1.

Quantifying chromatin-associated interactions: the HI-FI system.

Winkler DD, Luger K, Hieb AR.

Methods Enzymol. 2012;512:243-74. doi: 10.1016/B978-0-12-391940-3.00011-1.

PMID:
22910210
2.

Analysis of histone chaperone antisilencing function 1 interactions.

Scorgie JK, Donham DC 3rd, Churchill ME.

Methods Enzymol. 2012;512:223-41. doi: 10.1016/B978-0-12-391940-3.00010-X.

3.

Fluorescence strategies for high-throughput quantification of protein interactions.

Hieb AR, D'Arcy S, Kramer MA, White AE, Luger K.

Nucleic Acids Res. 2012 Mar;40(5):e33. doi: 10.1093/nar/gkr1045. Epub 2011 Nov 24.

4.

A coupled equilibrium approach to study nucleosome thermodynamics.

Andrews AJ, Luger K.

Methods Enzymol. 2011;488:265-85. doi: 10.1016/B978-0-12-381268-1.00011-2.

PMID:
21195232
5.

Chromatin modification by PSC occurs at one PSC per nucleosome and does not require the acidic patch of histone H2A.

Lo SM, McElroy KA, Francis NJ.

PLoS One. 2012;7(10):e47162. doi: 10.1371/journal.pone.0047162. Epub 2012 Oct 11.

6.

Histone- and DNA sequence-dependent stability of nucleosomes studied by single-pair FRET.

Tóth K, Böhm V, Sellmann C, Danner M, Hanne J, Berg M, Barz I, Gansen A, Langowski J.

Cytometry A. 2013 Sep;83(9):839-46. doi: 10.1002/cyto.a.22320. Epub 2013 Jul 10.

7.

Analysis of changes in nucleosome conformation using fluorescence resonance energy transfer.

Shahian T, Narlikar GJ.

Methods Mol Biol. 2012;833:337-49. doi: 10.1007/978-1-61779-477-3_20.

PMID:
22183603
9.

Structure of the CENP-A nucleosome and its implications for centromeric chromatin architecture.

Tachiwana H, Kurumizaka H.

Genes Genet Syst. 2011;86(6):357-64. Review.

10.

Transcription of dinucleosomal templates.

Wolffe AP, Ura K.

Methods. 1997 May;12(1):10-9.

PMID:
9169190
11.

Single molecule fluorescence methodologies for investigating transcription factor binding kinetics to nucleosomes and DNA.

Luo Y, North JA, Poirier MG.

Methods. 2014 Dec;70(2-3):108-18. doi: 10.1016/j.ymeth.2014.09.011. Epub 2014 Oct 7.

12.

Current progress on structural studies of nucleosomes containing histone H3 variants.

Kurumizaka H, Horikoshi N, Tachiwana H, Kagawa W.

Curr Opin Struct Biol. 2013 Feb;23(1):109-15. doi: 10.1016/j.sbi.2012.10.009. Epub 2012 Dec 22. Review.

PMID:
23265997
13.

Nucleosome interactions and stability in an ordered nucleosome array model system.

Blacketer MJ, Feely SJ, Shogren-Knaak MA.

J Biol Chem. 2010 Nov 5;285(45):34597-607. doi: 10.1074/jbc.M110.140061. Epub 2010 Aug 25.

14.
15.

Trajectory of nucleosomal linker DNA studied by fluorescence resonance energy transfer.

Tóth K, Brun N, Langowski J.

Biochemistry. 2001 Jun 12;40(23):6921-8.

PMID:
11389607
16.

Quantitative analysis of HP1alpha binding to nucleosomal arrays.

Fan JY, Zhou J, Tremethick DJ.

Methods. 2007 Mar;41(3):286-90.

PMID:
17309838
17.

Nucleoplasmin-mediated unfolding of chromatin involves the displacement of linker-associated chromatin proteins.

Ramos I, Prado A, Finn RM, Muga A, Ausió J.

Biochemistry. 2005 Jun 14;44(23):8274-81.

PMID:
15938617
18.

Intra- and inter-nucleosomal protein-DNA interactions of the core histone tail domains in a model system.

Zheng C, Hayes JJ.

J Biol Chem. 2003 Jun 27;278(26):24217-24. Epub 2003 Apr 15.

19.

Unzipping single DNA molecules to study nucleosome structure and dynamics.

Li M, Wang MD.

Methods Enzymol. 2012;513:29-58. doi: 10.1016/B978-0-12-391938-0.00002-1.

20.

H2A.Z and H3.3 histone variants affect nucleosome structure: biochemical and biophysical studies.

Thakar A, Gupta P, Ishibashi T, Finn R, Silva-Moreno B, Uchiyama S, Fukui K, Tomschik M, Ausio J, Zlatanova J.

Biochemistry. 2009 Nov 24;48(46):10852-7. doi: 10.1021/bi901129e.

PMID:
19856965

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