Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 101


Large-scale transcriptome characterization and mass discovery of SNPs in globe artichoke and its related taxa.

Scaglione D, Lanteri S, Acquadro A, Lai Z, Knapp SJ, Rieseberg L, Portis E.

Plant Biotechnol J. 2012 Oct;10(8):956-69. doi: 10.1111/j.1467-7652.2012.00725.x. Epub 2012 Jul 31.


Population structure of Cynara cardunculus complex and the origin of the conspecific crops artichoke and cardoon.

Gatto A, De Paola D, Bagnoli F, Vendramin GG, Sonnante G.

Ann Bot. 2013 Sep;112(5):855-65. doi: 10.1093/aob/mct150. Epub 2013 Jul 21.


RAD tag sequencing as a source of SNP markers in Cynara cardunculus L.

Scaglione D, Acquadro A, Portis E, Tirone M, Knapp SJ, Lanteri S.

BMC Genomics. 2012 Jan 3;13:3. doi: 10.1186/1471-2164-13-3.


Genetic mapping and annotation of genomic microsatellites isolated from globe artichoke.

Acquadro A, Lanteri S, Scaglione D, Arens P, Vosman B, Portis E.

Theor Appl Genet. 2009 May;118(8):1573-87. doi: 10.1007/s00122-009-1005-6. Epub 2009 Mar 27.


Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome.

Azam S, Thakur V, Ruperao P, Shah T, Balaji J, Amindala B, Farmer AD, Studholme DJ, May GD, Edwards D, Jones JD, Varshney RK.

Am J Bot. 2012 Feb;99(2):186-92. doi: 10.3732/ajb.1100419. Epub 2012 Feb 1.


Amplified fragment length polymorphism for genetic diversity assessment in globe artichoke.

Lanteri S, Saba E, Cadinu M, Mallica GM, Baghino L, Portis E.

Theor Appl Genet. 2004 May;108(8):1534-44. Epub 2004 Feb 14.


Genetic mapping and identification of QTL for earliness in the globe artichoke/cultivated cardoon complex.

Portis E, Scaglione D, Acquadro A, Mauromicale G, Mauro R, Knapp SJ, Lanteri S.

BMC Res Notes. 2012 May 23;5:252. doi: 10.1186/1756-0500-5-252.


Construction of a reference molecular linkage map of globe artichoke (Cynara cardunculus var. scolymus).

Portis E, Mauromicale G, Mauro R, Acquadro A, Scaglione D, Lanteri S.

Theor Appl Genet. 2009 Dec;120(1):59-70. doi: 10.1007/s00122-009-1159-2. Epub 2009 Sep 29.


The genome sequence of the outbreeding globe artichoke constructed de novo incorporating a phase-aware low-pass sequencing strategy of F1 progeny.

Scaglione D, Reyes-Chin-Wo S, Acquadro A, Froenicke L, Portis E, Beitel C, Tirone M, Mauro R, Lo Monaco A, Mauromicale G, Faccioli P, Cattivelli L, Rieseberg L, Michelmore R, Lanteri S.

Sci Rep. 2016 Jan 20;6:19427. doi: 10.1038/srep19427.


Genetic mapping and characterization of the globe artichoke (+)-germacrene A synthase gene, encoding the first dedicated enzyme for biosynthesis of the bitter sesquiterpene lactone cynaropicrin.

Menin B, Comino C, Portis E, Moglia A, Cankar K, Bouwmeester HJ, Lanteri S, Beekwilder J.

Plant Sci. 2012 Jul;190:1-8. doi: 10.1016/j.plantsci.2012.03.006. Epub 2012 Mar 23.


SNP discovery by illumina-based transcriptome sequencing of the olive and the genetic characterization of Turkish olive genotypes revealed by AFLP, SSR and SNP markers.

Kaya HB, Cetin O, Kaya H, Sahin M, Sefer F, Kahraman A, Tanyolac B.

PLoS One. 2013 Sep 13;8(9):e73674. doi: 10.1371/journal.pone.0073674. eCollection 2013.


Development and characterization of microsatellite markers in Cynara cardunculus L.

Acquadro A, Portis E, Lee D, Donini P, Lanteri S.

Genome. 2005 Apr;48(2):217-25.


Ontology and diversity of transcript-associated microsatellites mined from a globe artichoke EST database.

Scaglione D, Acquadro A, Portis E, Taylor CA, Lanteri S, Knapp SJ.

BMC Genomics. 2009 Sep 28;10:454. doi: 10.1186/1471-2164-10-454.


Genetic map of artichoke × wild cardoon: toward a consensus map for Cynara cardunculus.

Sonnante G, Gatto A, Morgese A, Montemurro F, Sarli G, Blanco E, Pignone D.

Theor Appl Genet. 2011 Nov;123(7):1215-29. doi: 10.1007/s00122-011-1661-1. Epub 2011 Jul 29.


De novo assembly of the pepper transcriptome (Capsicum annuum): a benchmark for in silico discovery of SNPs, SSRs and candidate genes.

Ashrafi H, Hill T, Stoffel K, Kozik A, Yao J, Chin-Wo SR, Van Deynze A.

BMC Genomics. 2012 Oct 30;13:571. doi: 10.1186/1471-2164-13-571.


Advances in genetics and molecular breeding of three legume crops of semi-arid tropics using next-generation sequencing and high-throughput genotyping technologies.

Varshney RK, Kudapa H, Roorkiwal M, Thudi M, Pandey MK, Saxena RK, Chamarthi SK, Mohan SM, Mallikarjuna N, Upadhyaya H, Gaur PM, Krishnamurthy L, Saxena KB, Nigam SN, Pande S.

J Biosci. 2012 Nov;37(5):811-20. Review.


Prevalence of single nucleotide polymorphism among 27 diverse alfalfa genotypes as assessed by transcriptome sequencing.

Li X, Acharya A, Farmer AD, Crow JA, Bharti AK, Kramer RS, Wei Y, Han Y, Gou J, May GD, Monteros MJ, Brummer EC.

BMC Genomics. 2012 Oct 29;13:568. doi: 10.1186/1471-2164-13-568.


Orthology Guided Assembly in highly heterozygous crops: creating a reference transcriptome to uncover genetic diversity in Lolium perenne.

Ruttink T, Sterck L, Rohde A, Bendixen C, Rouzé P, Asp T, Van de Peer Y, Roldan-Ruiz I.

Plant Biotechnol J. 2013 Jun;11(5):605-17. doi: 10.1111/pbi.12051. Epub 2013 Feb 21.


A first linkage map of globe artichoke (Cynara cardunculus var. scolymus L.) based on AFLP, S-SAP, M-AFLP and microsatellite markers.

Lanteri S, Acquadro A, Comino C, Mauro R, Mauromicale G, Portis E.

Theor Appl Genet. 2006 May;112(8):1532-42. Epub 2006 Mar 25.


A SNP resource for Douglas-fir: de novo transcriptome assembly and SNP detection and validation.

Howe GT, Yu J, Knaus B, Cronn R, Kolpak S, Dolan P, Lorenz WW, Dean JF.

BMC Genomics. 2013 Feb 28;14:137. doi: 10.1186/1471-2164-14-137.

Supplemental Content

Support Center