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Items: 1 to 20 of 49

1.

Comparative genomic and transcriptional analyses of CRISPR systems across the genus Pyrobaculum.

Bernick DL, Cox CL, Dennis PP, Lowe TM.

Front Microbiol. 2012 Jul 13;3:251. doi: 10.3389/fmicb.2012.00251. eCollection 2012.

2.

Transcriptional map of respiratory versatility in the hyperthermophilic crenarchaeon Pyrobaculum aerophilum.

Cozen AE, Weirauch MT, Pollard KS, Bernick DL, Stuart JM, Lowe TM.

J Bacteriol. 2009 Feb;191(3):782-94. doi: 10.1128/JB.00965-08. Epub 2008 Dec 1.

3.

An archaeal immune system can detect multiple protospacer adjacent motifs (PAMs) to target invader DNA.

Fischer S, Maier LK, Stoll B, Brendel J, Fischer E, Pfeiffer F, Dyall-Smith M, Marchfelder A.

J Biol Chem. 2012 Sep 28;287(40):33351-63. Epub 2012 Jul 5.

4.

Constraints on anaerobic respiration in the hyperthermophilic Archaea Pyrobaculum islandicum and Pyrobaculum aerophilum.

Feinberg LF, Srikanth R, Vachet RW, Holden JF.

Appl Environ Microbiol. 2008 Jan;74(2):396-402. Epub 2007 Nov 26.

5.

Modulation of CRISPR locus transcription by the repeat-binding protein Cbp1 in Sulfolobus.

Deng L, Kenchappa CS, Peng X, She Q, Garrett RA.

Nucleic Acids Res. 2012 Mar;40(6):2470-80. doi: 10.1093/nar/gkr1111. Epub 2011 Dec 1.

6.

Archaeal CRISPR-based immune systems: exchangeable functional modules.

Garrett RA, Vestergaard G, Shah SA.

Trends Microbiol. 2011 Nov;19(11):549-56. doi: 10.1016/j.tim.2011.08.002. Epub 2011 Sep 22. Review.

PMID:
21945420
7.

Diversity of Antisense and Other Non-Coding RNAs in Archaea Revealed by Comparative Small RNA Sequencing in Four Pyrobaculum Species.

Bernick DL, Dennis PP, Lui LM, Lowe TM.

Front Microbiol. 2012 Jul 2;3:231. doi: 10.3389/fmicb.2012.00231. eCollection 2012.

8.

Discovery of Pyrobaculum small RNA families with atypical pseudouridine guide RNA features.

Bernick DL, Dennis PP, Höchsmann M, Lowe TM.

RNA. 2012 Mar;18(3):402-11. doi: 10.1261/rna.031385.111. Epub 2012 Jan 26.

9.

Characterization of CRISPR RNA biogenesis and Cas6 cleavage-mediated inhibition of a provirus in the haloarchaeon Haloferax mediterranei.

Li M, Liu H, Han J, Liu J, Wang R, Zhao D, Zhou J, Xiang H.

J Bacteriol. 2013 Feb;195(4):867-75. doi: 10.1128/JB.01688-12. Epub 2012 Dec 14.

10.

CRISPR elements in the Thermococcales: evidence for associated horizontal gene transfer in Pyrococcus furiosus.

Portillo MC, Gonzalez JM.

J Appl Genet. 2009;50(4):421-30. doi: 10.1007/BF03195703.

PMID:
19875895
11.

Comparative genomic structures of Mycobacterium CRISPR-Cas.

He L, Fan X, Xie J.

J Cell Biochem. 2012 Jul;113(7):2464-73. doi: 10.1002/jcb.24121.

PMID:
22396173
12.

In vivo activity of CRISPR-mediated virus defence in a hyperthermophilic archaeon.

Manica A, Zebec Z, Teichmann D, Schleper C.

Mol Microbiol. 2011 Apr;80(2):481-91. doi: 10.1111/j.1365-2958.2011.07586.x. Epub 2011 Mar 8.

13.

RNAi: prokaryotes get in on the act.

van der Oost J, Brouns SJ.

Cell. 2009 Nov 25;139(5):863-5. doi: 10.1016/j.cell.2009.11.018.

14.

Solution properties of the archaeal CRISPR DNA repeat-binding homeodomain protein Cbp2.

Kenchappa CS, Heidarsson PO, Kragelund BB, Garrett RA, Poulsen FM.

Nucleic Acids Res. 2013 Mar 1;41(5):3424-35. doi: 10.1093/nar/gks1465. Epub 2013 Jan 15.

15.

CRISPR-based immune systems of the Sulfolobales: complexity and diversity.

Garrett RA, Shah SA, Vestergaard G, Deng L, Gudbergsdottir S, Kenchappa CS, Erdmann S, She Q.

Biochem Soc Trans. 2011 Jan;39(1):51-7. doi: 10.1042/BST0390051. Review.

PMID:
21265746
16.

CRISPR-Cas systems in bacteria and archaea: versatile small RNAs for adaptive defense and regulation.

Bhaya D, Davison M, Barrangou R.

Annu Rev Genet. 2011;45:273-97. doi: 10.1146/annurev-genet-110410-132430. Review.

PMID:
22060043
17.

Memory of viral infections by CRISPR-Cas adaptive immune systems: acquisition of new information.

Fineran PC, Charpentier E.

Virology. 2012 Dec 20;434(2):202-9. doi: 10.1016/j.virol.2012.10.003. Epub 2012 Nov 2. Review.

18.

Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea.

Lecompte O, Ripp R, Puzos-Barbe V, Duprat S, Heilig R, Dietrich J, Thierry JC, Poch O.

Genome Res. 2001 Jun;11(6):981-93.

19.

The ring of confidence: a haloarchaeal CRISPR/Cas system.

Maier LK, Stoll B, Brendel J, Fischer S, Pfeiffer F, Dyall-Smith M, Marchfelder A.

Biochem Soc Trans. 2013 Feb 1;41(1):374-8. doi: 10.1042/BST20120263.

PMID:
23356314
20.

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