Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 44

1.

Small RNA expression profiling by high-throughput sequencing: implications of enzymatic manipulation.

Zhuang F, Fuchs RT, Robb GB.

J Nucleic Acids. 2012;2012:360358. doi: 10.1155/2012/360358. Epub 2012 Jun 20.

2.

Detection of small RNAs and microRNAs using deep sequencing technology.

Havecker ER.

Methods Mol Biol. 2011;732:55-68. doi: 10.1007/978-1-61779-083-6_5.

PMID:
21431705
3.

Regulatory RNAs in archaea: first target identification in Methanoarchaea.

Prasse D, Ehlers C, Backofen R, Schmitz RA.

Biochem Soc Trans. 2013 Feb 1;41(1):344-9. doi: 10.1042/BST20120280.

PMID:
23356309
4.

Sample preparation for small RNA massive parallel sequencing.

Gommans WM, Berezikov E.

Methods Mol Biol. 2012;786:167-78. doi: 10.1007/978-1-61779-292-2_10.

PMID:
21938626
5.

Small RNA Profiling by Next-Generation Sequencing Using High-Definition Adapters.

Billmeier M, Xu P.

Methods Mol Biol. 2017;1580:45-57. doi: 10.1007/978-1-4939-6866-4_4.

PMID:
28439825
6.

Next-generation sequencing of miRNAs with Roche 454 GS-FLX technology: steps for a successful application.

Soares AR, Pereira PM, Santos MA.

Methods Mol Biol. 2012;822:189-204. doi: 10.1007/978-1-61779-427-8_13.

PMID:
22144200
7.

The UEA Small RNA Workbench: A Suite of Computational Tools for Small RNA Analysis.

Mohorianu I, Stocks MB, Applegate CS, Folkes L, Moulton V.

Methods Mol Biol. 2017;1580:193-224. doi: 10.1007/978-1-4939-6866-4_14.

PMID:
28439835
8.

Comprehensive processing of high-throughput small RNA sequencing data including quality checking, normalization, and differential expression analysis using the UEA sRNA Workbench.

Beckers M, Mohorianu I, Stocks M, Applegate C, Dalmay T, Moulton V.

RNA. 2017 Jun;23(6):823-835. doi: 10.1261/rna.059360.116. Epub 2017 Mar 13.

9.

High-throughput sequencing of Hop stunt viroid-derived small RNAs from cucumber leaves and phloem.

Martinez G, Donaire L, Llave C, Pallas V, Gomez G.

Mol Plant Pathol. 2010 May;11(3):347-59. doi: 10.1111/j.1364-3703.2009.00608.x.

PMID:
20447283
10.

How to find small non-coding RNAs in bacteria.

Vogel J, Sharma CM.

Biol Chem. 2005 Dec;386(12):1219-38. Review.

PMID:
16336117
11.

Experimental approaches for the discovery and characterization of regulatory small RNA.

Sharma CM, Vogel J.

Curr Opin Microbiol. 2009 Oct;12(5):536-46. doi: 10.1016/j.mib.2009.07.006. Epub 2009 Sep 14. Review.

PMID:
19758836
12.

A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti.

Schlüter JP, Reinkensmeier J, Daschkey S, Evguenieva-Hackenberg E, Janssen S, Jänicke S, Becker JD, Giegerich R, Becker A.

BMC Genomics. 2010 Apr 17;11:245. doi: 10.1186/1471-2164-11-245.

13.

Bioinformatic prediction and experimental verification of sRNAs in the haloarchaeon Haloferax volcanii.

Babski J, Tjaden B, Voss B, Jellen-Ritter A, Marchfelder A, Hess WR, Soppa J.

RNA Biol. 2011 Sep-Oct;8(5):806-16. doi: 10.4161/rna.8.5.16039. Epub 2011 Jun 29.

PMID:
21712649
14.

Functional characterization of plant small RNAs based on next-generation sequencing data.

Chen M, Meng Y, Gu H, Chen D.

Comput Biol Chem. 2010 Dec;34(5-6):308-12. doi: 10.1016/j.compbiolchem.2010.10.001. Epub 2010 Oct 27.

PMID:
21030312
15.

Current-generation high-throughput sequencing: deepening insights into mammalian transcriptomes.

Blencowe BJ, Ahmad S, Lee LJ.

Genes Dev. 2009 Jun 15;23(12):1379-86. doi: 10.1101/gad.1788009. Review.

16.

Regulatory RNAs in Haloferax volcanii.

Fischer S, Benz J, Späth B, Jellen-Ritter A, Heyer R, Dörr M, Maier LK, Menzel-Hobeck C, Lehr M, Jantzer K, Babski J, Soppa J, Marchfelder A.

Biochem Soc Trans. 2011 Jan;39(1):159-62. doi: 10.1042/BST0390159.

PMID:
21265765
17.

New virus discovery by deep sequencing of small RNAs.

Singh K, Kaur R, Qiu W.

Methods Mol Biol. 2012;883:177-91. doi: 10.1007/978-1-61779-839-9_14.

PMID:
22589134
18.

Dynamics of Salmonella small RNA expression in non-growing bacteria located inside eukaryotic cells.

Ortega AD, Gonzalo-Asensio J, García-del Portillo F.

RNA Biol. 2012 Apr;9(4):469-88. doi: 10.4161/rna.19317. Epub 2012 Feb 16.

PMID:
22336761
19.

Computational approaches for the discovery of bacterial small RNAs.

Kulkarni RV, Kulkarni PR.

Methods. 2007 Oct;43(2):131-9.

PMID:
17889800
20.

Genetic screens to identify bacterial sRNA regulators.

Mandin P.

Methods Mol Biol. 2012;905:41-60. doi: 10.1007/978-1-61779-949-5_4.

PMID:
22735997

Supplemental Content

Support Center