Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 282

1.

RNA-seq analysis of the C. briggsae transcriptome.

Uyar B, Chu JS, Vergara IA, Chua SY, Jones MR, Wong T, Baillie DL, Chen N.

Genome Res. 2012 Aug;22(8):1567-80. doi: 10.1101/gr.134601.111. Epub 2012 Jul 6.

2.

The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics.

Stein LD, Bao Z, Blasiar D, Blumenthal T, Brent MR, Chen N, Chinwalla A, Clarke L, Clee C, Coghlan A, Coulson A, D'Eustachio P, Fitch DH, Fulton LA, Fulton RE, Griffiths-Jones S, Harris TW, Hillier LW, Kamath R, Kuwabara PE, Mardis ER, Marra MA, Miner TL, Minx P, Mullikin JC, Plumb RW, Rogers J, Schein JE, Sohrmann M, Spieth J, Stajich JE, Wei C, Willey D, Wilson RK, Durbin R, Waterston RH.

PLoS Biol. 2003 Nov;1(2):E45. Epub 2003 Nov 17.

3.

Annotation of two large contiguous regions from the Haemonchus contortus genome using RNA-seq and comparative analysis with Caenorhabditis elegans.

Laing R, Hunt M, Protasio AV, Saunders G, Mungall K, Laing S, Jackson F, Quail M, Beech R, Berriman M, Gilleard JS.

PLoS One. 2011;6(8):e23216. doi: 10.1371/journal.pone.0023216. Epub 2011 Aug 15.

4.

Large synteny blocks revealed between Caenorhabditis elegans and Caenorhabditis briggsae genomes using OrthoCluster.

Vergara IA, Chen N.

BMC Genomics. 2010 Sep 24;11:516. doi: 10.1186/1471-2164-11-516.

5.

A global analysis of C. elegans trans-splicing.

Allen MA, Hillier LW, Waterston RH, Blumenthal T.

Genome Res. 2011 Feb;21(2):255-64. doi: 10.1101/gr.113811.110. Epub 2010 Dec 22.

6.

C. elegans sequences that control trans-splicing and operon pre-mRNA processing.

Graber JH, Salisbury J, Hutchins LN, Blumenthal T.

RNA. 2007 Sep;13(9):1409-26. Epub 2007 Jul 13.

7.

Genome-wide analysis of trans-splicing in the nematode Pristionchus pacificus unravels conserved gene functions for germline and dauer development in divergent operons.

Sinha A, Langnick C, Sommer RJ, Dieterich C.

RNA. 2014 Sep;20(9):1386-97. doi: 10.1261/rna.041954.113. Epub 2014 Jul 11.

8.
9.

Trans-splicing and operons in C. elegans.

Blumenthal T.

WormBook. 2012 Nov 20:1-11. doi: 10.1895/wormbook.1.5.2. Review.

10.

Identification of transcription start sites of trans-spliced genes: uncovering unusual operon arrangements.

Morton JJ, Blumenthal T.

RNA. 2011 Feb;17(2):327-37. doi: 10.1261/rna.2447111. Epub 2010 Dec 14.

11.
12.

Operons and SL2 trans-splicing exist in nematodes outside the genus Caenorhabditis.

Evans D, Zorio D, MacMorris M, Winter CE, Lea K, Blumenthal T.

Proc Natl Acad Sci U S A. 1997 Sep 2;94(18):9751-6.

13.

Operon structure and trans-splicing in the nematode Pristionchus pacificus.

Lee KZ, Sommer RJ.

Mol Biol Evol. 2003 Dec;20(12):2097-103. Epub 2003 Aug 29.

PMID:
12949121
14.

Operon conservation and the evolution of trans-splicing in the phylum Nematoda.

Guiliano DB, Blaxter ML.

PLoS Genet. 2006 Nov 24;2(11):e198. Epub 2006 Oct 9.

15.

The gut esterase gene (ges-1) from the nematodes Caenorhabditis elegans and Caenorhabditis briggsae.

Kennedy BP, Aamodt EJ, Allen FL, Chung MA, Heschl MF, McGhee JD.

J Mol Biol. 1993 Feb 20;229(4):890-908.

PMID:
8445654
16.

Conservation of sequence and function of the pag-3 genes from C. elegans and C. briggsae.

Aamodt E, Shen L, Marra M, Schein J, Rose B, McDermott JB.

Gene. 2000 Feb 8;243(1-2):67-74.

PMID:
10675614
17.

A global analysis of Caenorhabditis elegans operons.

Blumenthal T, Evans D, Link CD, Guffanti A, Lawson D, Thierry-Mieg J, Thierry-Mieg D, Chiu WL, Duke K, Kiraly M, Kim SK.

Nature. 2002 Jun 20;417(6891):851-4.

PMID:
12075352
19.

Analysis of the role of Caenorhabditis elegans GC-AG introns in regulated splicing.

Farrer T, Roller AB, Kent WJ, Zahler AM.

Nucleic Acids Res. 2002 Aug 1;30(15):3360-7.

20.

SL2-like spliced leader RNAs in the basal nematode Prionchulus punctatus: New insight into the evolution of nematode SL2 RNAs.

Harrison N, Kalbfleisch A, Connolly B, Pettitt J, Müller B.

RNA. 2010 Aug;16(8):1500-7. doi: 10.1261/rna.2155010. Epub 2010 Jun 21.

Supplemental Content

Support Center