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Items: 1 to 20 of 779

1.

Evolutionary dynamics and functional specialization of plant paralogs formed by whole and small-scale genome duplications.

Carretero-Paulet L, Fares MA.

Mol Biol Evol. 2012 Nov;29(11):3541-51. doi: 10.1093/molbev/mss162. Epub 2012 Jun 24.

PMID:
22734049
2.

Evidence of interaction network evolution by whole-genome duplications: a case study in MADS-box proteins.

Veron AS, Kaufmann K, Bornberg-Bauer E.

Mol Biol Evol. 2007 Mar;24(3):670-8. Epub 2006 Dec 14.

PMID:
17175526
3.

Identity and divergence of protein domain architectures after the yeast whole-genome duplication event.

Grassi L, Fusco D, Sellerio A, Corà D, Bassetti B, Caselle M, Lagomarsino MC.

Mol Biosyst. 2010 Nov;6(11):2305-15. doi: 10.1039/c003507f. Epub 2010 Aug 26.

PMID:
20820472
4.

The roles of whole-genome and small-scale duplications in the functional specialization of Saccharomyces cerevisiae genes.

Fares MA, Keane OM, Toft C, Carretero-Paulet L, Jones GW.

PLoS Genet. 2013;9(1):e1003176. doi: 10.1371/journal.pgen.1003176. Epub 2013 Jan 3.

5.

Extensive divergence in alternative splicing patterns after gene and genome duplication during the evolutionary history of Arabidopsis.

Zhang PG, Huang SZ, Pin AL, Adams KL.

Mol Biol Evol. 2010 Jul;27(7):1686-97. doi: 10.1093/molbev/msq054. Epub 2010 Feb 25.

PMID:
20185454
6.

On the retention of gene duplicates prone to dominant deleterious mutations.

Malaguti G, Singh PP, Isambert H.

Theor Popul Biol. 2014 May;93:38-51. doi: 10.1016/j.tpb.2014.01.004. Epub 2014 Feb 12.

PMID:
24530892
7.

Local synteny and codon usage contribute to asymmetric sequence divergence of Saccharomyces cerevisiae gene duplicates.

Bu L, Bergthorsson U, Katju V.

BMC Evol Biol. 2011 Sep 28;11:279. doi: 10.1186/1471-2148-11-279.

8.

Do disparate mechanisms of duplication add similar genes to the genome?

Davis JC, Petrov DA.

Trends Genet. 2005 Oct;21(10):548-51.

PMID:
16098632
9.

Whole-genome duplications in the ancestral vertebrate are detectable in the distribution of gene family sizes of tetrapod species.

Hughes T, Liberles DA.

J Mol Evol. 2008 Oct;67(4):343-57. doi: 10.1007/s00239-008-9145-x. Epub 2008 Sep 25.

PMID:
18815825
10.

Importance of lineage-specific expansion of plant tandem duplicates in the adaptive response to environmental stimuli.

Hanada K, Zou C, Lehti-Shiu MD, Shinozaki K, Shiu SH.

Plant Physiol. 2008 Oct;148(2):993-1003. doi: 10.1104/pp.108.122457. Epub 2008 Aug 20.

11.

Functional diversification of B MADS-box homeotic regulators of flower development: Adaptive evolution in protein-protein interaction domains after major gene duplication events.

Hernández-Hernández T, Martínez-Castilla LP, Alvarez-Buylla ER.

Mol Biol Evol. 2007 Feb;24(2):465-81. Epub 2006 Nov 29. Erratum in: Mol Biol Evol. 2010 Nov;27(11):2666.

PMID:
17135333
12.

Ancient whole genome duplications, novelty and diversification: the WGD Radiation Lag-Time Model.

Schranz ME, Mohammadin S, Edger PP.

Curr Opin Plant Biol. 2012 Apr;15(2):147-53. doi: 10.1016/j.pbi.2012.03.011. Epub 2012 Apr 3. Review.

PMID:
22480429
13.

Divergence in Enzymatic Activities in the Soybean GST Supergene Family Provides New Insight into the Evolutionary Dynamics of Whole-Genome Duplicates.

Liu HJ, Tang ZX, Han XM, Yang ZL, Zhang FM, Yang HL, Liu YJ, Zeng QY.

Mol Biol Evol. 2015 Nov;32(11):2844-59. doi: 10.1093/molbev/msv156. Epub 2015 Jul 28.

14.
15.

Gene conversion and functional divergence in the beta-globin gene family.

Aguileta G, Bielawski JP, Yang Z.

J Mol Evol. 2004 Aug;59(2):177-89.

PMID:
15486692
16.

The early stages of duplicate gene evolution.

Moore RC, Purugganan MD.

Proc Natl Acad Sci U S A. 2003 Dec 23;100(26):15682-7. Epub 2003 Dec 11.

17.

Genome duplication and gene-family evolution: the case of three OXPHOS gene families.

De Grassi A, Lanave C, Saccone C.

Gene. 2008 Sep 15;421(1-2):1-6. doi: 10.1016/j.gene.2008.05.011. Epub 2008 Jun 23. Review.

PMID:
18573316
18.

Evolutionary dynamics of duplicated genes in plants.

Lawton-Rauh A.

Mol Phylogenet Evol. 2003 Dec;29(3):396-409. Review.

PMID:
14615182
19.

The ghost of selection past: rates of evolution and functional divergence of anciently duplicated genes.

Van de Peer Y, Taylor JS, Braasch I, Meyer A.

J Mol Evol. 2001 Oct-Nov;53(4-5):436-46.

PMID:
11675603
20.

Independent sorting-out of thousands of duplicated gene pairs in two yeast species descended from a whole-genome duplication.

Scannell DR, Frank AC, Conant GC, Byrne KP, Woolfit M, Wolfe KH.

Proc Natl Acad Sci U S A. 2007 May 15;104(20):8397-402. Epub 2007 May 9.

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