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Items: 1 to 20 of 78

1.

Transcriptome sequencing of black grouse (Tetrao tetrix) for immune gene discovery and microsatellite development.

Wang B, Ekblom R, Castoe TA, Jones EP, Kozma R, Bongcam-Rudloff E, Pollock DD, Höglund J.

Open Biol. 2012 Apr;2(4):120054. doi: 10.1098/rsob.120054.

2.

Sequencing of the core MHC region of black grouse (Tetrao tetrix) and comparative genomics of the galliform MHC.

Wang B, Ekblom R, Strand TM, Portela-Bens S, Höglund J.

BMC Genomics. 2012 Oct 15;13:553. doi: 10.1186/1471-2164-13-553.

3.

The Mhc class II of the Black grouse (Tetrao tetrix) consists of low numbers of B and Y genes with variable diversity and expression.

Strand T, Westerdahl H, Höglund J, V Alatalo R, Siitari H.

Immunogenetics. 2007 Sep;59(9):725-34. Epub 2007 Jul 25.

PMID:
17653538
4.

Whole genome sequencing of the black grouse (Tetrao tetrix): reference guided assembly suggests faster-Z and MHC evolution.

Wang B, Ekblom R, Bunikis I, Siitari H, Höglund J.

BMC Genomics. 2014 Mar 6;15:180. doi: 10.1186/1471-2164-15-180.

5.

Development of molecular resources for an intertidal clam, Sinonovacula constricta, using 454 transcriptome sequencing.

Niu D, Wang L, Sun F, Liu Z, Li J.

PLoS One. 2013 Jul 25;8(7):e67456. doi: 10.1371/journal.pone.0067456. Print 2013.

6.

De novo assembly and analysis of crow lungs transcriptome.

Vijayakumar P, Raut AA, Kumar P, Sharma D, Mishra A.

Genome. 2014 Sep;57(9):499-506. doi: 10.1139/gen-2014-0122. Epub 2015 Jan 11.

PMID:
25633965
7.

A garter snake transcriptome: pyrosequencing, de novo assembly, and sex-specific differences.

Schwartz TS, Tae H, Yang Y, Mockaitis K, Van Hemert JL, Proulx SR, Choi JH, Bronikowski AM.

BMC Genomics. 2010 Dec 7;11:694. doi: 10.1186/1471-2164-11-694.

8.

Genotyping of black grouse MHC class II B using reference Strand-Mediated Conformational Analysis (RSCA).

Strand TM, Höglund J.

BMC Res Notes. 2011 Jun 14;4:183. doi: 10.1186/1756-0500-4-183.

9.

Complete mitochondrial genome of black grouse (Lyrurus tetrix).

Li B, Zhu C, Ding P, Bai S, Cui J.

Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):134-5. doi: 10.3109/19401736.2013.878911. Epub 2014 Jan 22.

PMID:
24450707
10.

Generation and analysis of blueberry transcriptome sequences from leaves, developing fruit, and flower buds from cold acclimation through deacclimation.

Rowland LJ, Alkharouf N, Darwish O, Ogden EL, Polashock JJ, Bassil NV, Main D.

BMC Plant Biol. 2012 Apr 2;12:46. doi: 10.1186/1471-2229-12-46.

11.

Sympatric ecological speciation meets pyrosequencing: sampling the transcriptome of the apple maggot Rhagoletis pomonella.

Schwarz D, Robertson HM, Feder JL, Varala K, Hudson ME, Ragland GJ, Hahn DA, Berlocher SH.

BMC Genomics. 2009 Dec 27;10:633. doi: 10.1186/1471-2164-10-633.

12.

De novo assembly and characterization of the leaf, bud, and fruit transcriptome from the vulnerable tree Juglans mandshurica for the development of 20 new microsatellite markers using Illumina sequencing.

Hu Z, Zhang T, Gao XX, Wang Y, Zhang Q, Zhou HJ, Zhao GF, Wang ML, Woeste KE, Zhao P.

Mol Genet Genomics. 2016 Apr;291(2):849-62. doi: 10.1007/s00438-015-1147-y. Epub 2015 Nov 27.

PMID:
26614514
13.

Characterization of the house sparrow (Passer domesticus) transcriptome: a resource for molecular ecology and immunogenetics.

Ekblom R, Wennekes P, Horsburgh GJ, Burke T.

Mol Ecol Resour. 2014 May;14(3):636-46. doi: 10.1111/1755-0998.12213. Epub 2014 Jan 10.

PMID:
24345231
14.

Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery.

Parchman TL, Geist KS, Grahnen JA, Benkman CW, Buerkle CA.

BMC Genomics. 2010 Mar 16;11:180. doi: 10.1186/1471-2164-11-180.

15.
16.

Large scale in-silico identification and characterization of simple sequence repeats (SSRs) from de novo assembled transcriptome of Catharanthus roseus (L.) G. Don.

Kumar S, Shah N, Garg V, Bhatia S.

Plant Cell Rep. 2014 Jun;33(6):905-18. doi: 10.1007/s00299-014-1569-8. Epub 2014 Feb 1.

PMID:
24482265
17.

Genetic impoverishment of the last black grouse (Tetrao tetrix) population in the Netherlands: detectable only with a reference from the past.

Larsson JK, Jansman HA, Segelbacher G, Höglund J, Koelewijn HP.

Mol Ecol. 2008 Apr;17(8):1897-904. doi: 10.1111/j.1365-294X.2008.03717.x. Epub 2008 Mar 10.

PMID:
18346125
18.

The major histocompatibility complex (Mhc) class IIB region has greater genomic structural flexibility and diversity in the quail than the chicken.

Hosomichi K, Shiina T, Suzuki S, Tanaka M, Shimizu S, Iwamoto S, Hara H, Yoshida Y, Kulski JK, Inoko H, Hanzawa K.

BMC Genomics. 2006 Dec 21;7:322.

19.

A multilocus population genetic survey of the greater sage-grouse across their range.

Oyler-McCance SJ, Taylor SE, Quinn TW.

Mol Ecol. 2005 Apr;14(5):1293-310. Erratum in: Mol Ecol. 2007 Dec;16(23):5110.

PMID:
15813771
20.

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