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Items: 1 to 20 of 235

1.

mcaGUI: microbial community analysis R-Graphical User Interface (GUI).

Copeland WK, Krishnan V, Beck D, Settles M, Foster JA, Cho KC, Day M, Hickey R, Schütte UM, Zhou X, Williams CJ, Forney LJ, Abdo Z.

Bioinformatics. 2012 Aug 15;28(16):2198-9. doi: 10.1093/bioinformatics/bts338. Epub 2012 Jun 12.

2.

oneChannelGUI: a graphical interface to Bioconductor tools, designed for life scientists who are not familiar with R language.

Sanges R, Cordero F, Calogero RA.

Bioinformatics. 2007 Dec 15;23(24):3406-8. Epub 2007 Sep 17.

PMID:
17875544
3.

affylmGUI: a graphical user interface for linear modeling of single channel microarray data.

Wettenhall JM, Simpson KM, Satterley K, Smyth GK.

Bioinformatics. 2006 Apr 1;22(7):897-9. Epub 2006 Feb 2.

PMID:
16455752
4.

SimHap GUI: an intuitive graphical user interface for genetic association analysis.

Carter KW, McCaskie PA, Palmer LJ.

BMC Bioinformatics. 2008 Dec 25;9:557. doi: 10.1186/1471-2105-9-557.

5.

EBImage--an R package for image processing with applications to cellular phenotypes.

Pau G, Fuchs F, Sklyar O, Boutros M, Huber W.

Bioinformatics. 2010 Apr 1;26(7):979-81. doi: 10.1093/bioinformatics/btq046.

6.

imDEV: a graphical user interface to R multivariate analysis tools in Microsoft Excel.

Grapov D, Newman JW.

Bioinformatics. 2012 Sep 1;28(17):2288-90. doi: 10.1093/bioinformatics/bts439. Epub 2012 Jul 18.

7.

RNASeqGUI: a GUI for analysing RNA-Seq data.

Russo F, Angelini C.

Bioinformatics. 2014 Sep 1;30(17):2514-6. doi: 10.1093/bioinformatics/btu308. Epub 2014 May 7.

PMID:
24812338
8.

CHARMM-GUI: a web-based graphical user interface for CHARMM.

Jo S, Kim T, Iyer VG, Im W.

J Comput Chem. 2008 Aug;29(11):1859-65. doi: 10.1002/jcc.20945.

PMID:
18351591
9.

The design of Jemboss: a graphical user interface to EMBOSS.

Carver T, Bleasby A.

Bioinformatics. 2003 Sep 22;19(14):1837-43.

PMID:
14512356
10.

RGG: a general GUI Framework for R scripts.

Visne I, Dilaveroglu E, Vierlinger K, Lauss M, Yildiz A, Weinhaeusel A, Noehammer C, Leisch F, Kriegner A.

BMC Bioinformatics. 2009 Mar 2;10:74. doi: 10.1186/1471-2105-10-74.

11.

digeR: a graphical user interface R package for analyzing 2D-DIGE data.

Fan Y, Murphy TB, Watson RW.

Bioinformatics. 2009 Nov 15;25(22):3033-4. doi: 10.1093/bioinformatics/btp514. Epub 2009 Aug 25.

PMID:
19706743
12.

DNAshapeR: an R/Bioconductor package for DNA shape prediction and feature encoding.

Chiu TP, Comoglio F, Zhou T, Yang L, Paro R, Rohs R.

Bioinformatics. 2016 Apr 15;32(8):1211-3. doi: 10.1093/bioinformatics/btv735. Epub 2015 Dec 14.

13.

RamiGO: an R/Bioconductor package providing an AmiGO visualize interface.

Schröder MS, Gusenleitner D, Quackenbush J, Culhane AC, Haibe-Kains B.

Bioinformatics. 2013 Mar 1;29(5):666-8. doi: 10.1093/bioinformatics/bts708. Epub 2013 Jan 6.

14.

Explicet: graphical user interface software for metadata-driven management, analysis and visualization of microbiome data.

Robertson CE, Harris JK, Wagner BD, Granger D, Browne K, Tatem B, Feazel LM, Park K, Pace NR, Frank DN.

Bioinformatics. 2013 Dec 1;29(23):3100-1. doi: 10.1093/bioinformatics/btt526. Epub 2013 Sep 10.

15.

Girafe--an R/Bioconductor package for functional exploration of aligned next-generation sequencing reads.

Toedling J, Ciaudo C, Voinnet O, Heard E, Barillot E.

Bioinformatics. 2010 Nov 15;26(22):2902-3. doi: 10.1093/bioinformatics/btq531. Epub 2010 Sep 21.

16.

rTANDEM, an R/Bioconductor package for MS/MS protein identification.

Fournier F, Joly Beauparlant C, Paradis R, Droit A.

Bioinformatics. 2014 Aug 1;30(15):2233-4. doi: 10.1093/bioinformatics/btu178. Epub 2014 Apr 3.

PMID:
24700319
17.

A novel R-package graphic user interface for the analysis of metabonomic profiles.

Izquierdo-García JL, Rodríguez I, Kyriazis A, Villa P, Barreiro P, Desco M, Ruiz-Cabello J.

BMC Bioinformatics. 2009 Oct 29;10:363. doi: 10.1186/1471-2105-10-363.

18.

Codelink: an R package for analysis of GE healthcare gene expression bioarrays.

Diez D, Alvarez R, Dopazo A.

Bioinformatics. 2007 May 1;23(9):1168-9. Epub 2007 Mar 7.

PMID:
17344240
19.

DASS-GUI: a user interface for identification and analysis of significant patterns in non-sequential data.

Hollunder J, Friedel M, Kuiper M, Wilhelm T.

Bioinformatics. 2010 Apr 1;26(7):987-9. doi: 10.1093/bioinformatics/btq071. Epub 2010 Feb 19.

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