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Genome rearrangements caused by depletion of essential DNA replication proteins in Saccharomyces cerevisiae.

Cheng E, Vaisica JA, Ou J, Baryshnikova A, Lu Y, Roth FP, Brown GW.

Genetics. 2012 Sep;192(1):147-60. doi: 10.1534/genetics.112.141051. Epub 2012 Jun 5.


Chromosomal translocations in yeast induced by low levels of DNA polymerase a model for chromosome fragile sites.

Lemoine FJ, Degtyareva NP, Lobachev K, Petes TD.

Cell. 2005 Mar 11;120(5):587-98.


Migrating bubble during break-induced replication drives conservative DNA synthesis.

Saini N, Ramakrishnan S, Elango R, Ayyar S, Zhang Y, Deem A, Ira G, Haber JE, Lobachev KS, Malkova A.

Nature. 2013 Oct 17;502(7471):389-92. doi: 10.1038/nature12584. Epub 2013 Sep 11.


The F-box protein Dia2 overcomes replication impedance to promote genome stability in Saccharomyces cerevisiae.

Blake D, Luke B, Kanellis P, Jorgensen P, Goh T, Penfold S, Breitkreutz BJ, Durocher D, Peter M, Tyers M.

Genetics. 2006 Dec;174(4):1709-27. Epub 2006 Jun 4.


Multiple pathways cooperate in the suppression of genome instability in Saccharomyces cerevisiae.

Myung K, Chen C, Kolodner RD.

Nature. 2001 Jun 28;411(6841):1073-6.


Recombination between retrotransposons as a source of chromosome rearrangements in the yeast Saccharomyces cerevisiae.

Mieczkowski PA, Lemoine FJ, Petes TD.

DNA Repair (Amst). 2006 Sep 8;5(9-10):1010-20. Epub 2006 Jun 23. Review.


CENP-B preserves genome integrity at replication forks paused by retrotransposon LTR.

Zaratiegui M, Vaughn MW, Irvine DV, Goto D, Watt S, Bähler J, Arcangioli B, Martienssen RA.

Nature. 2011 Jan 6;469(7328):112-5. doi: 10.1038/nature09608. Epub 2010 Dec 12.


Chromosome rearrangements via template switching between diverged repeated sequences.

Anand RP, Tsaponina O, Greenwell PW, Lee CS, Du W, Petes TD, Haber JE.

Genes Dev. 2014 Nov 1;28(21):2394-406. doi: 10.1101/gad.250258.114.


Multiple regulatory mechanisms to inhibit untimely initiation of DNA replication are important for stable genome maintenance.

Tanaka S, Araki H.

PLoS Genet. 2011 Jun;7(6):e1002136. doi: 10.1371/journal.pgen.1002136. Epub 2011 Jun 16.


Functions of Saccharomyces cerevisiae 14-3-3 proteins in response to DNA damage and to DNA replication stress.

Lottersberger F, Rubert F, Baldo V, Lucchini G, Longhese MP.

Genetics. 2003 Dec;165(4):1717-32.


Rapid analysis of Saccharomyces cerevisiae genome rearrangements by multiplex ligation-dependent probe amplification.

Chan JE, Kolodner RD.

PLoS Genet. 2012;8(3):e1002539. doi: 10.1371/journal.pgen.1002539. Epub 2012 Mar 1.


A survey of essential gene function in the yeast cell division cycle.

Yu L, Peña Castillo L, Mnaimneh S, Hughes TR, Brown GW.

Mol Biol Cell. 2006 Nov;17(11):4736-47. Epub 2006 Aug 30.


Chromosome aberrations resulting from double-strand DNA breaks at a naturally occurring yeast fragile site composed of inverted ty elements are independent of Mre11p and Sae2p.

Casper AM, Greenwell PW, Tang W, Petes TD.

Genetics. 2009 Oct;183(2):423-39, 1SI-26SI. doi: 10.1534/genetics.109.106385. Epub 2009 Jul 27.


Orchestration of the S-phase and DNA damage checkpoint pathways by replication forks from early origins.

Caldwell JM, Chen Y, Schollaert KL, Theis JF, Babcock GF, Newlon CS, Sanchez Y.

J Cell Biol. 2008 Mar 24;180(6):1073-86. doi: 10.1083/jcb.200706009. Epub 2008 Mar 17.


Diploid-specific [corrected] genome stability genes of S. cerevisiae: genomic screen reveals haploidization as an escape from persisting DNA rearrangement stress.

Alabrudzinska M, Skoneczny M, Skoneczna A.

PLoS One. 2011;6(6):e21124. doi: 10.1371/journal.pone.0021124. Epub 2011 Jun 17. Erratum in: PLoS One. 2011;6(11). doi:10.1371/annotation/77daccf9-9976-4d0e-b666-35a900cb2d17.


A genetic screen for increased loss of heterozygosity in Saccharomyces cerevisiae.

Andersen MP, Nelson ZW, Hetrick ED, Gottschling DE.

Genetics. 2008 Jul;179(3):1179-95. doi: 10.1534/genetics.108.089250. Epub 2008 Jun 18.


Genome-wide distribution of ORC and MCM proteins in S. cerevisiae: high-resolution mapping of replication origins.

Wyrick JJ, Aparicio JG, Chen T, Barnett JD, Jennings EG, Young RA, Bell SP, Aparicio OM.

Science. 2001 Dec 14;294(5550):2357-60.


Centromere replication timing determines different forms of genomic instability in Saccharomyces cerevisiae checkpoint mutants during replication stress.

Feng W, Bachant J, Collingwood D, Raghuraman MK, Brewer BJ.

Genetics. 2009 Dec;183(4):1249-60. doi: 10.1534/genetics.109.107508. Epub 2009 Oct 5.

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