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Items: 1 to 20 of 79

1.

Escape from preferential retention following repeated whole genome duplications in plants.

Schnable JC, Wang X, Pires JC, Freeling M.

Front Plant Sci. 2012 May 15;3:94. doi: 10.3389/fpls.2012.00094. eCollection 2012.

2.

Evolutionary dynamics and functional specialization of plant paralogs formed by whole and small-scale genome duplications.

Carretero-Paulet L, Fares MA.

Mol Biol Evol. 2012 Nov;29(11):3541-51. doi: 10.1093/molbev/mss162. Epub 2012 Jun 24.

PMID:
22734049
3.

Extensive divergence in alternative splicing patterns after gene and genome duplication during the evolutionary history of Arabidopsis.

Zhang PG, Huang SZ, Pin AL, Adams KL.

Mol Biol Evol. 2010 Jul;27(7):1686-97. doi: 10.1093/molbev/msq054. Epub 2010 Feb 25.

PMID:
20185454
4.

Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes.

Edger PP, Pires JC.

Chromosome Res. 2009;17(5):699-717. doi: 10.1007/s10577-009-9055-9. Review.

PMID:
19802709
5.

Gene loss and evolutionary rates following whole-genome duplication in teleost fishes.

Brunet FG, Roest Crollius H, Paris M, Aury JM, Gibert P, Jaillon O, Laudet V, Robinson-Rechavi M.

Mol Biol Evol. 2006 Sep;23(9):1808-16. Epub 2006 Jun 29.

PMID:
16809621
6.

Dose-sensitivity, conserved non-coding sequences, and duplicate gene retention through multiple tetraploidies in the grasses.

Schnable JC, Pedersen BS, Subramaniam S, Freeling M.

Front Plant Sci. 2011 Mar 10;2:2. doi: 10.3389/fpls.2011.00002. eCollection 2011.

7.

Genome and gene duplications and gene expression divergence: a view from plants.

Wang Y, Wang X, Paterson AH.

Ann N Y Acad Sci. 2012 May;1256:1-14. doi: 10.1111/j.1749-6632.2011.06384.x. Epub 2012 Jan 18. Review.

PMID:
22257007
8.

Insights from paleogenomic and population studies into the consequences of dosage sensitive gene expression in plants.

Birchler JA.

Curr Opin Plant Biol. 2012 Nov;15(5):544-8. doi: 10.1016/j.pbi.2012.08.005. Epub 2012 Aug 30. Review.

PMID:
22939251
9.

Importance of lineage-specific expansion of plant tandem duplicates in the adaptive response to environmental stimuli.

Hanada K, Zou C, Lehti-Shiu MD, Shinozaki K, Shiu SH.

Plant Physiol. 2008 Oct;148(2):993-1003. doi: 10.1104/pp.108.122457. Epub 2008 Aug 20.

10.
11.

The role of duplications in the evolution of genomes highlights the need for evolutionary-based approaches in comparative genomics.

Levasseur A, Pontarotti P.

Biol Direct. 2011 Feb 18;6:11. doi: 10.1186/1745-6150-6-11. Review.

12.

Whole genome duplications and expansion of the vertebrate GATA transcription factor gene family.

Gillis WQ, St John J, Bowerman B, Schneider SQ.

BMC Evol Biol. 2009 Aug 20;9:207. doi: 10.1186/1471-2148-9-207.

13.

Evidence of interaction network evolution by whole-genome duplications: a case study in MADS-box proteins.

Veron AS, Kaufmann K, Bornberg-Bauer E.

Mol Biol Evol. 2007 Mar;24(3):670-8. Epub 2006 Dec 14.

PMID:
17175526
14.

Genome duplication and gene-family evolution: the case of three OXPHOS gene families.

De Grassi A, Lanave C, Saccone C.

Gene. 2008 Sep 15;421(1-2):1-6. doi: 10.1016/j.gene.2008.05.011. Epub 2008 Jun 23. Review.

PMID:
18573316
15.

Differential retention of metabolic genes following whole-genome duplication.

Gout JF, Duret L, Kahn D.

Mol Biol Evol. 2009 May;26(5):1067-72. doi: 10.1093/molbev/msp026. Epub 2009 Feb 13.

PMID:
19218282
16.

The preferential retention of starch synthesis genes reveals the impact of whole-genome duplication on grass evolution.

Wu Y, Zhu Z, Ma L, Chen M.

Mol Biol Evol. 2008 Jun;25(6):1003-6. doi: 10.1093/molbev/msn052. Epub 2008 Feb 23.

PMID:
18296698
17.

Both mechanism and age of duplications contribute to biased gene retention patterns in plants.

Rody HV, Baute GJ, Rieseberg LH, Oliveira LO.

BMC Genomics. 2017 Jan 6;18(1):46. doi: 10.1186/s12864-016-3423-6.

18.

Diagnosing duplications--can it be done?

Durand D, Hoberman R.

Trends Genet. 2006 Mar;22(3):156-64. Epub 2006 Jan 26. Review.

PMID:
16442663
19.

Gene duplication within the Green Lineage: the case of TEL genes.

Charon C, Bruggeman Q, Thareau V, Henry Y.

J Exp Bot. 2012 Sep;63(14):5061-77. doi: 10.1093/jxb/ers181. Epub 2012 Aug 3. Review.

PMID:
22865910
20.

The endothelin system: evolution of vertebrate-specific ligand-receptor interactions by three rounds of genome duplication.

Braasch I, Volff JN, Schartl M.

Mol Biol Evol. 2009 Apr;26(4):783-99. doi: 10.1093/molbev/msp015. Epub 2009 Jan 27.

PMID:
19174480

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