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Items: 1 to 20 of 300

1.

Extracting semantically enriched events from biomedical literature.

Miwa M, Thompson P, McNaught J, Kell DB, Ananiadou S.

BMC Bioinformatics. 2012 May 23;13:108. doi: 10.1186/1471-2105-13-108.

2.

Enriching a biomedical event corpus with meta-knowledge annotation.

Thompson P, Nawaz R, McNaught J, Ananiadou S.

BMC Bioinformatics. 2011 Oct 10;12:393. doi: 10.1186/1471-2105-12-393.

3.

Boosting automatic event extraction from the literature using domain adaptation and coreference resolution.

Miwa M, Thompson P, Ananiadou S.

Bioinformatics. 2012 Jul 1;28(13):1759-65. doi: 10.1093/bioinformatics/bts237. Epub 2012 Apr 25.

4.

Negated bio-events: analysis and identification.

Nawaz R, Thompson P, Ananiadou S.

BMC Bioinformatics. 2013 Jan 16;14:14. doi: 10.1186/1471-2105-14-14.

5.

Knowledge based word-concept model estimation and refinement for biomedical text mining.

Jimeno Yepes A, Berlanga R.

J Biomed Inform. 2015 Feb;53:300-7. doi: 10.1016/j.jbi.2014.11.015. Epub 2014 Dec 12.

6.

Biomedical events extraction using the hidden vector state model.

Zhou D, He Y.

Artif Intell Med. 2011 Nov;53(3):205-13. doi: 10.1016/j.artmed.2011.08.002. Epub 2011 Sep 25.

PMID:
21945347
7.

Extracting rate changes in transcriptional regulation from MEDLINE abstracts.

Liu W, Miao K, Li G, Chang K, Zheng J, Rajapakse JC.

BMC Bioinformatics. 2014;15 Suppl 2:S4. doi: 10.1186/1471-2105-15-S2-S4. Epub 2014 Jan 24.

8.

Event extraction with complex event classification using rich features.

Miwa M, Saetre R, Kim JD, Tsujii J.

J Bioinform Comput Biol. 2010 Feb;8(1):131-46.

PMID:
20183879
9.

Event-based text mining for biology and functional genomics.

Ananiadou S, Thompson P, Nawaz R, McNaught J, Kell DB.

Brief Funct Genomics. 2015 May;14(3):213-30. doi: 10.1093/bfgp/elu015. Epub 2014 Jun 6. Review.

10.

Event trigger identification for biomedical events extraction using domain knowledge.

Zhou D, Zhong D, He Y.

Bioinformatics. 2014 Jun 1;30(11):1587-94. doi: 10.1093/bioinformatics/btu061. Epub 2014 Jan 30.

PMID:
24489368
11.

Wide coverage biomedical event extraction using multiple partially overlapping corpora.

Miwa M, Pyysalo S, Ohta T, Ananiadou S.

BMC Bioinformatics. 2013 Jun 3;14:175. doi: 10.1186/1471-2105-14-175.

12.

Extracting biomedical events from pairs of text entities.

Liu X, Bordes A, Grandvalet Y.

BMC Bioinformatics. 2015;16 Suppl 10:S8. doi: 10.1186/1471-2105-16-S10-S8. Epub 2015 Jul 13.

13.

Overview of the BioCreative III Workshop.

Arighi CN, Lu Z, Krallinger M, Cohen KB, Wilbur WJ, Valencia A, Hirschman L, Wu CH.

BMC Bioinformatics. 2011 Oct 3;12 Suppl 8:S1. doi: 10.1186/1471-2105-12-S8-S1.

14.

Knowledge-based extraction of adverse drug events from biomedical text.

Kang N, Singh B, Bui C, Afzal Z, van Mulligen EM, Kors JA.

BMC Bioinformatics. 2014 Mar 4;15:64. doi: 10.1186/1471-2105-15-64.

15.

NCBI disease corpus: a resource for disease name recognition and concept normalization.

Doğan RI, Leaman R, Lu Z.

J Biomed Inform. 2014 Feb;47:1-10. doi: 10.1016/j.jbi.2013.12.006. Epub 2014 Jan 3.

16.

A comparison and user-based evaluation of models of textual information structure in the context of cancer risk assessment.

Guo Y, Korhonen A, Liakata M, Silins I, Hogberg J, Stenius U.

BMC Bioinformatics. 2011 Mar 8;12:69. doi: 10.1186/1471-2105-12-69.

17.

The BioLexicon: a large-scale terminological resource for biomedical text mining.

Thompson P, McNaught J, Montemagni S, Calzolari N, del Gratta R, Lee V, Marchi S, Monachini M, Pezik P, Quochi V, Rupp CJ, Sasaki Y, Venturi G, Rebholz-Schuhmann D, Ananiadou S.

BMC Bioinformatics. 2011 Oct 12;12:397. doi: 10.1186/1471-2105-12-397.

18.

Text mining facilitates database curation - extraction of mutation-disease associations from Bio-medical literature.

Ravikumar KE, Wagholikar KB, Li D, Kocher JP, Liu H.

BMC Bioinformatics. 2015 Jun 6;16:185. doi: 10.1186/s12859-015-0609-x. Erratum in: BMC Bioinformatics. 2016;17(1):162.

19.

Construction of an annotated corpus to support biomedical information extraction.

Thompson P, Iqbal SA, McNaught J, Ananiadou S.

BMC Bioinformatics. 2009 Oct 23;10:349. doi: 10.1186/1471-2105-10-349.

20.

University of Turku in the BioNLP'11 Shared Task.

Björne J, Ginter F, Salakoski T.

BMC Bioinformatics. 2012 Jun 26;13 Suppl 11:S4. doi: 10.1186/1471-2105-13-S11-S4.

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