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Items: 1 to 20 of 153

1.

New virus discovery by deep sequencing of small RNAs.

Singh K, Kaur R, Qiu W.

Methods Mol Biol. 2012;883:177-91. doi: 10.1007/978-1-61779-839-9_14.

PMID:
22589134
2.
3.

Identification and characterization of small non-coding RNAs from Chinese fir by high throughput sequencing.

Wan LC, Wang F, Guo X, Lu S, Qiu Z, Zhao Y, Zhang H, Lin J.

BMC Plant Biol. 2012 Aug 15;12:146. doi: 10.1186/1471-2229-12-146.

4.

Discovery of posttranscriptional regulatory RNAs using next generation sequencing technologies.

Gelderman G, Contreras LM.

Methods Mol Biol. 2013;985:269-95. doi: 10.1007/978-1-62703-299-5_14.

PMID:
23417809
5.

High-throughput sequence analysis of small RNAs in grapevine (Vitis vinifera L.) affected by grapevine leafroll disease.

Alabi OJ, Zheng Y, Jagadeeswaran G, Sunkar R, Naidu RA.

Mol Plant Pathol. 2012 Dec;13(9):1060-76. doi: 10.1111/j.1364-3703.2012.00815.x. Epub 2012 Jul 24.

PMID:
22827483
6.

Small RNA library construction for high-throughput sequencing.

McGinn J, Czech B.

Methods Mol Biol. 2014;1093:195-208. doi: 10.1007/978-1-62703-694-8_16.

PMID:
24178567
7.

Association of a novel DNA virus with the grapevine vein-clearing and vine decline syndrome.

Zhang Y, Singh K, Kaur R, Qiu W.

Phytopathology. 2011 Sep;101(9):1081-90. doi: 10.1094/PHYTO-02-11-0034.

8.

Complete viral genome sequence and discovery of novel viruses by deep sequencing of small RNAs: a generic method for diagnosis, discovery and sequencing of viruses.

Kreuze JF, Perez A, Untiveros M, Quispe D, Fuentes S, Barker I, Simon R.

Virology. 2009 May 25;388(1):1-7. doi: 10.1016/j.virol.2009.03.024. Epub 2009 Apr 23.

9.

Detection of small RNAs and microRNAs using deep sequencing technology.

Havecker ER.

Methods Mol Biol. 2011;732:55-68. doi: 10.1007/978-1-61779-083-6_5.

PMID:
21431705
10.

SearchSmallRNA: a graphical interface tool for the assemblage of viral genomes using small RNA libraries data.

de Andrade RR, Vaslin MF.

Virol J. 2014 Mar 7;11:45. doi: 10.1186/1743-422X-11-45.

11.

[Advance in Deep Sequencing of Small RNAs for Virus Identification and Discovery].

Li Y, Wang H, Zhang Chen, Ma X.

Bing Du Xue Bao. 2015 Jul;31(4):457-62. Review. Chinese.

PMID:
26524920
12.

Deep sequencing analysis of viral short RNAs from an infected Pinot Noir grapevine.

Pantaleo V, Saldarelli P, Miozzi L, Giampetruzzi A, Gisel A, Moxon S, Dalmay T, Bisztray G, Burgyan J.

Virology. 2010 Dec 5;408(1):49-56. doi: 10.1016/j.virol.2010.09.001. Epub 2010 Sep 26.

13.

Sample preparation for small RNA massive parallel sequencing.

Gommans WM, Berezikov E.

Methods Mol Biol. 2012;786:167-78. doi: 10.1007/978-1-61779-292-2_10.

PMID:
21938626
14.

Methods for small RNA preparation for digital gene expression profiling by next-generation sequencing.

Linsen SE, Cuppen E.

Methods Mol Biol. 2012;822:205-17. doi: 10.1007/978-1-61779-427-8_14.

PMID:
22144201
15.

Deep sequencing of small RNAs in tomato for virus and viroid identification and strain differentiation.

Li R, Gao S, Hernandez AG, Wechter WP, Fei Z, Ling KS.

PLoS One. 2012;7(5):e37127. doi: 10.1371/journal.pone.0037127. Epub 2012 May 18.

16.

De novo reconstruction of consensus master genomes of plant RNA and DNA viruses from siRNAs.

Seguin J, Rajeswaran R, Malpica-López N, Martin RR, Kasschau K, Dolja VV, Otten P, Farinelli L, Pooggin MM.

PLoS One. 2014 Feb 11;9(2):e88513. doi: 10.1371/journal.pone.0088513. eCollection 2014.

17.

Generation of plant small RNA cDNA libraries for high-throughput sequencing.

Zhu QH, Helliwell CA.

Methods Mol Biol. 2012;894:123-37. doi: 10.1007/978-1-61779-882-5_9.

PMID:
22678577
18.

Small RNA Library Preparation and Illumina Sequencing in Plants.

Bilichak A, Golubov A, Kovalchuk I.

Methods Mol Biol. 2017;1456:189-196.

PMID:
27770367
19.

Global identification of small RNA targets in plants by sequencing sliced ends of messenger RNAs.

Li YF, Sunkar R.

Methods Mol Biol. 2013;956:119-29. doi: 10.1007/978-1-62703-194-3_10.

PMID:
23135849
20.

Small RNA Profiling by Next-Generation Sequencing Using High-Definition Adapters.

Billmeier M, Xu P.

Methods Mol Biol. 2017;1580:45-57. doi: 10.1007/978-1-4939-6866-4_4.

PMID:
28439825

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