Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 101


Reference genome sequence of the model plant Setaria.

Bennetzen JL, Schmutz J, Wang H, Percifield R, Hawkins J, Pontaroli AC, Estep M, Feng L, Vaughn JN, Grimwood J, Jenkins J, Barry K, Lindquist E, Hellsten U, Deshpande S, Wang X, Wu X, Mitros T, Triplett J, Yang X, Ye CY, Mauro-Herrera M, Wang L, Li P, Sharma M, Sharma R, Ronald PC, Panaud O, Kellogg EA, Brutnell TP, Doust AN, Tuskan GA, Rokhsar D, Devos KM.

Nat Biotechnol. 2012 May 13;30(6):555-61. doi: 10.1038/nbt.2196.


Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential.

Zhang G, Liu X, Quan Z, Cheng S, Xu X, Pan S, Xie M, Zeng P, Yue Z, Wang W, Tao Y, Bian C, Han C, Xia Q, Peng X, Cao R, Yang X, Zhan D, Hu J, Zhang Y, Li H, Li H, Li N, Wang J, Wang C, Wang R, Guo T, Cai Y, Liu C, Xiang H, Shi Q, Huang P, Chen Q, Li Y, Wang J, Zhao Z, Wang J.

Nat Biotechnol. 2012 May 13;30(6):549-54. doi: 10.1038/nbt.2195.


A haplotype map of genomic variations and genome-wide association studies of agronomic traits in foxtail millet (Setaria italica).

Jia G, Huang X, Zhi H, Zhao Y, Zhao Q, Li W, Chai Y, Yang L, Liu K, Lu H, Zhu C, Lu Y, Zhou C, Fan D, Weng Q, Guo Y, Huang T, Zhang L, Lu T, Feng Q, Hao H, Liu H, Lu P, Zhang N, Li Y, Guo E, Wang S, Wang S, Liu J, Zhang W, Chen G, Zhang B, Li W, Wang Y, Li H, Zhao B, Li J, Diao X, Han B.

Nat Genet. 2013 Aug;45(8):957-61. doi: 10.1038/ng.2673. Epub 2013 Jun 23.


Genome-wide development and use of microsatellite markers for large-scale genotyping applications in foxtail millet [Setaria italica (L.)].

Pandey G, Misra G, Kumari K, Gupta S, Parida SK, Chattopadhyay D, Prasad M.

DNA Res. 2013 Apr;20(2):197-207. doi: 10.1093/dnares/dst002. Epub 2013 Feb 3.


Novel genomes and genome constitutions identified by GISH and 5S rDNA and knotted1 genomic sequences in the genus Setaria.

Zhao M, Zhi H, Doust AN, Li W, Wang Y, Li H, Jia G, Wang Y, Zhang N, Diao X.

BMC Genomics. 2013 Apr 11;14:244. doi: 10.1186/1471-2164-14-244.


Development of highly polymorphic simple sequence repeat markers using genome-wide microsatellite variant analysis in Foxtail millet [Setaria italica (L.) P. Beauv].

Zhang S, Tang C, Zhao Q, Li J, Yang L, Qie L, Fan X, Li L, Zhang N, Zhao M, Liu X, Chai Y, Zhang X, Wang H, Li Y, Li W, Zhi H, Jia G, Diao X.

BMC Genomics. 2014 Jan 28;15:78. doi: 10.1186/1471-2164-15-78.


Setaria viridis and Setaria italica, model genetic systems for the Panicoid grasses.

Li P, Brutnell TP.

J Exp Bot. 2011 May;62(9):3031-7. doi: 10.1093/jxb/err096. Epub 2011 Mar 31. Review.


Sequence-based novel genomic microsatellite markers for robust genotyping purposes in foxtail millet [Setaria italica (L.) P. Beauv].

Gupta S, Kumari K, Sahu PP, Vidapu S, Prasad M.

Plant Cell Rep. 2012 Feb;31(2):323-37. doi: 10.1007/s00299-011-1168-x. Epub 2011 Oct 13.


Switchgrass genomic diversity, ploidy, and evolution: novel insights from a network-based SNP discovery protocol.

Lu F, Lipka AE, Glaubitz J, Elshire R, Cherney JH, Casler MD, Buckler ES, Costich DE.

PLoS Genet. 2013;9(1):e1003215. doi: 10.1371/journal.pgen.1003215. Epub 2013 Jan 17.


Genome-wide characterization of microRNA in foxtail millet (Setaria italica).

Yi F, Xie S, Liu Y, Qi X, Yu J.

BMC Plant Biol. 2013 Dec 13;13:212. doi: 10.1186/1471-2229-13-212.


Genetic control and comparative genomic analysis of flowering time in Setaria (Poaceae).

Mauro-Herrera M, Wang X, Barbier H, Brutnell TP, Devos KM, Doust AN.

G3 (Bethesda). 2013 Feb;3(2):283-95. doi: 10.1534/g3.112.005207. Epub 2013 Feb 1.


Genome-wide characterization of the SiDof gene family in foxtail millet (Setaria italica).

Zhang L, Liu B, Zheng G, Zhang A, Li R.

Biosystems. 2017 Jan;151:27-33. doi: 10.1016/j.biosystems.2016.11.007. Epub 2016 Nov 25.


Advances in Setaria genomics for genetic improvement of cereals and bioenergy grasses.

Muthamilarasan M, Prasad M.

Theor Appl Genet. 2015 Jan;128(1):1-14. doi: 10.1007/s00122-014-2399-3. Epub 2014 Sep 20. Review.


Development of Simple Sequence Repeats (SSR) markers in Setaria italica (Poaceae) and cross-amplification in related species.

Lin HS, Chiang CY, Chang SB, Kuoh CS.

Int J Mol Sci. 2011;12(11):7835-45. doi: 10.3390/ijms12117835. Epub 2011 Nov 11.


Genetic structure of landraces in foxtail millet (Setaria italica (L.) P. Beauv.) revealed with transposon display and interpretation to crop evolution of foxtail millet.

Hirano R, Naito K, Fukunaga K, Watanabe KN, Ohsawa R, Kawase M.

Genome. 2011 Jun;54(6):498-506. doi: 10.1139/g11-015. Epub 2011 May 30.


Genome-wide investigation and expression analyses of WD40 protein family in the model plant foxtail millet (Setaria italica L.).

Mishra AK, Muthamilarasan M, Khan Y, Parida SK, Prasad M.

PLoS One. 2014 Jan 23;9(1):e86852. doi: 10.1371/journal.pone.0086852. eCollection 2014.


Development and genetic mapping of SSR markers in foxtail millet [Setaria italica (L.) P. Beauv.].

Jia X, Zhang Z, Liu Y, Zhang C, Shi Y, Song Y, Wang T, Li Y.

Theor Appl Genet. 2009 Feb;118(4):821-9. doi: 10.1007/s00122-008-0942-9. Epub 2009 Jan 13.


Foxtail millet: a model crop for genetic and genomic studies in bioenergy grasses.

Lata C, Gupta S, Prasad M.

Crit Rev Biotechnol. 2013 Sep;33(3):328-43. doi: 10.3109/07388551.2012.716809. Epub 2012 Sep 18. Review.


Mapping of quantitative trait locus (QTLs) that contribute to germination and early seedling drought tolerance in the interspecific cross Setaria italicaƗSetaria viridis.

Qie L, Jia G, Zhang W, Schnable J, Shang Z, Li W, Liu B, Li M, Chai Y, Zhi H, Diao X.

PLoS One. 2014 Jul 17;9(7):e101868. doi: 10.1371/journal.pone.0101868. eCollection 2014.

Supplemental Content

Support Center