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Construction of physical maps for the sex-specific regions of papaya sex chromosomes.

Na JK, Wang J, Murray JE, Gschwend AR, Zhang W, Yu Q, Navajas-Pérez R, Feltus FA, Chen C, Kubat Z, Moore PH, Jiang J, Paterson AH, Ming R.

BMC Genomics. 2012 May 8;13:176. doi: 10.1186/1471-2164-13-176.


Accumulation of interspersed and sex-specific repeats in the non-recombining region of papaya sex chromosomes.

Na JK, Wang J, Ming R.

BMC Genomics. 2014 May 4;15:335. doi: 10.1186/1471-2164-15-335.


Construction of papaya male and female BAC libraries and application in physical mapping of the sex chromosomes.

Gschwend AR, Yu Q, Moore P, Saski C, Chen C, Wang J, Na JK, Ming R.

J Biomed Biotechnol. 2011;2011:929472. doi: 10.1155/2011/929472.


Sequencing papaya X and Yh chromosomes reveals molecular basis of incipient sex chromosome evolution.

Wang J, Na JK, Yu Q, Gschwend AR, Han J, Zeng F, Aryal R, VanBuren R, Murray JE, Zhang W, Navajas-Pérez R, Feltus FA, Lemke C, Tong EJ, Chen C, Wai CM, Singh R, Wang ML, Min XJ, Alam M, Charlesworth D, Moore PH, Jiang J, Paterson AH, Ming R.

Proc Natl Acad Sci U S A. 2012 Aug 21;109(34):13710-5. doi: 10.1073/pnas.1207833109.


Organelle DNA accumulation in the recently evolved papaya sex chromosomes.

VanBuren R, Ming R.

Mol Genet Genomics. 2013 Jun;288(5-6):277-84. doi: 10.1007/s00438-013-0747-7.


A physical map of the papaya genome with integrated genetic map and genome sequence.

Yu Q, Tong E, Skelton RL, Bowers JE, Jones MR, Murray JE, Hou S, Guan P, Acob RA, Luo MC, Moore PH, Alam M, Paterson AH, Ming R.

BMC Genomics. 2009 Aug 7;10:371. doi: 10.1186/1471-2164-10-371.


Genome sequence comparison reveals a candidate gene involved in male-hermaphrodite differentiation in papaya (Carica papaya) trees.

Ueno H, Urasaki N, Natsume S, Yoshida K, Tarora K, Shudo A, Terauchi R, Matsumura H.

Mol Genet Genomics. 2015 Apr;290(2):661-70. doi: 10.1007/s00438-014-0955-9.


Origin and domestication of papaya Yh chromosome.

VanBuren R, Zeng F, Chen C, Zhang J, Wai CM, Han J, Aryal R, Gschwend AR, Wang J, Na JK, Huang L, Zhang L, Miao W, Gou J, Arro J, Guyot R, Moore RC, Wang ML, Zee F, Charlesworth D, Moore PH, Yu Q, Ming R.

Genome Res. 2015 Apr;25(4):524-33. doi: 10.1101/gr.183905.114.


An integrated cytogenetic and physical map reveals unevenly distributed recombination spots along the papaya sex chromosomes.

Wai CM, Moore PH, Paull RE, Ming R, Yu Q.

Chromosome Res. 2012 Aug;20(6):753-67. doi: 10.1007/s10577-012-9312-1.


Chromosomal location and gene paucity of the male specific region on papaya Y chromosome.

Yu Q, Hou S, Hobza R, Feltus FA, Wang X, Jin W, Skelton RL, Blas A, Lemke C, Saw JH, Moore PH, Alam M, Jiang J, Paterson AH, Vyskot B, Ming R.

Mol Genet Genomics. 2007 Aug;278(2):177-85.


DNA methylation and heterochromatinization in the male-specific region of the primitive Y chromosome of papaya.

Zhang W, Wang X, Yu Q, Ming R, Jiang J.

Genome Res. 2008 Dec;18(12):1938-43. doi: 10.1101/gr.078808.108.


Sex specific expression and distribution of small RNAs in papaya.

Aryal R, Jagadeeswaran G, Zheng Y, Yu Q, Sunkar R, Ming R.

BMC Genomics. 2014 Jan 13;15:20. doi: 10.1186/1471-2164-15-20.


Low X/Y divergence in four pairs of papaya sex-linked genes.

Yu Q, Hou S, Feltus FA, Jones MR, Murray JE, Veatch O, Lemke C, Saw JH, Moore RC, Thimmapuram J, Liu L, Moore PH, Alam M, Jiang J, Paterson AH, Ming R.

Plant J. 2008 Jan;53(1):124-32.


Genetic and physical maps around the sex-determining M-locus of the dioecious plant asparagus.

Telgmann-Rauber A, Jamsari A, Kinney MS, Pires JC, Jung C.

Mol Genet Genomics. 2007 Sep;278(3):221-34.


Digital transcriptome analysis of putative sex-determination genes in papaya (Carica papaya).

Urasaki N, Tarora K, Shudo A, Ueno H, Tamaki M, Miyagi N, Adaniya S, Matsumura H.

PLoS One. 2012;7(7):e40904. doi: 10.1371/journal.pone.0040904.


Rapid divergence and expansion of the X chromosome in papaya.

Gschwend AR, Yu Q, Tong EJ, Zeng F, Han J, VanBuren R, Aryal R, Charlesworth D, Moore PH, Paterson AH, Ming R.

Proc Natl Acad Sci U S A. 2012 Aug 21;109(34):13716-21. doi: 10.1073/pnas.1121096109.


Physical mapping of a large plant genome using global high-information-content-fingerprinting: the distal region of the wheat ancestor Aegilops tauschii chromosome 3DS.

Fleury D, Luo MC, Dvorak J, Ramsay L, Gill BS, Anderson OD, You FM, Shoaei Z, Deal KR, Langridge P.

BMC Genomics. 2010 Jun 17;11:382. doi: 10.1186/1471-2164-11-382.


Construction of a sequence-tagged high-density genetic map of papaya for comparative structural and evolutionary genomics in brassicales.

Chen C, Yu Q, Hou S, Li Y, Eustice M, Skelton RL, Veatch O, Herdes RE, Diebold L, Saw J, Feng Y, Qian W, Bynum L, Wang L, Moore PH, Paull RE, Alam M, Ming R.

Genetics. 2007 Dec;177(4):2481-91.


A detailed physical map of the horse Y chromosome.

Raudsepp T, Santani A, Wallner B, Kata SR, Ren C, Zhang HB, Womack JE, Skow LC, Chowdhary BP.

Proc Natl Acad Sci U S A. 2004 Jun 22;101(25):9321-6.

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