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Items: 1 to 20 of 167

1.

Analysis of plant LTR-retrotransposons at the fine-scale family level reveals individual molecular patterns.

Domingues DS, Cruz GM, Metcalfe CJ, Nogueira FT, Vicentini R, Alves Cde S, Van Sluys MA.

BMC Genomics. 2012 Apr 16;13:137. doi: 10.1186/1471-2164-13-137.

2.

Major repeat components covering one-third of the ginseng (Panax ginseng C.A. Meyer) genome and evidence for allotetraploidy.

Choi HI, Waminal NE, Park HM, Kim NH, Choi BS, Park M, Choi D, Lim YP, Kwon SJ, Park BS, Kim HH, Yang TJ.

Plant J. 2014 Mar;77(6):906-16. doi: 10.1111/tpj.12441. Epub 2014 Feb 24.

3.

Correlated evolution of LTR retrotransposons and genome size in the genus Eleocharis.

Zedek F, Smerda J, Smarda P, Bureš P.

BMC Plant Biol. 2010 Nov 30;10:265. doi: 10.1186/1471-2229-10-265.

4.

Co-evolution of plant LTR-retrotransposons and their host genomes.

Zhao M, Ma J.

Protein Cell. 2013 Jul;4(7):493-501. doi: 10.1007/s13238-013-3037-6. Epub 2013 Jun 23. Review.

5.
6.

Evolutionary conservation, diversity and specificity of LTR-retrotransposons in flowering plants: insights from genome-wide analysis and multi-specific comparison.

Du J, Tian Z, Hans CS, Laten HM, Cannon SB, Jackson SA, Shoemaker RC, Ma J.

Plant J. 2010 Aug;63(4):584-98. doi: 10.1111/j.1365-313X.2010.04263.x.

7.

Evolutionary dynamics of retrotransposons following autopolyploidy in the Buckler Mustard species complex.

Bardil A, Tayalé A, Parisod C.

Plant J. 2015 May;82(4):621-31. doi: 10.1111/tpj.12837.

8.

Genome-wide characterization of long terminal repeat -retrotransposons in apple reveals the differences in heterogeneity and copy number between Ty1-copia and Ty3-gypsy retrotransposons.

Sun HY, Dai HY, Zhao GL, Ma Y, Ou CQ, Li H, Li LG, Zhang ZH.

J Integr Plant Biol. 2008 Sep;50(9):1130-9. doi: 10.1111/j.1744-7909.2008.00717.x.

PMID:
18844781
9.

Survey of long terminal repeat retrotransposons of domesticated silkworm (Bombyx mori).

Jin-Shan X, Qing-You X, Jun L, Guo-Qing P, Ze-Yang Z.

Insect Biochem Mol Biol. 2005 Aug;35(8):921-9.

PMID:
15944087
10.

The impact of Ty3-gypsy group LTR retrotransposons Fatima on B-genome specificity of polyploid wheats.

Salina EA, Sergeeva EM, Adonina IG, Shcherban AB, Belcram H, Huneau C, Chalhoub B.

BMC Plant Biol. 2011 Jun 3;11:99. doi: 10.1186/1471-2229-11-99.

11.

LTR retrotransposon landscape in Medicago truncatula: more rapid removal than in rice.

Wang H, Liu JS.

BMC Genomics. 2008 Aug 10;9:382. doi: 10.1186/1471-2164-9-382.

12.

Long terminal repeat retrotransposons of Oryza sativa.

McCarthy EM, Liu J, Lizhi G, McDonald JF.

Genome Biol. 2002 Sep 13;3(10):RESEARCH0053. Epub 2002 Sep 13.

13.

LTR retroelements are intrinsic components of transcriptional networks in frogs.

Grau JH, Poustka AJ, Meixner M, Plötner J.

BMC Genomics. 2014 Jul 23;15:626. doi: 10.1186/1471-2164-15-626.

14.

Diversity of LTR-retrotransposons and Enhancer/Suppressor Mutator-like transposons in cassava (Manihot esculenta Crantz).

Gbadegesin MA, Wills MA, Beeching JR.

Mol Genet Genomics. 2008 Oct;280(4):305-17. doi: 10.1007/s00438-008-0366-x. Epub 2008 Jul 18.

PMID:
18636276
15.

Network dynamics of eukaryotic LTR retroelements beyond phylogenetic trees.

Llorens C, Muñoz-Pomer A, Bernad L, Botella H, Moya A.

Biol Direct. 2009 Nov 2;4:41. doi: 10.1186/1745-6150-4-41.

16.

Young, intact and nested retrotransposons are abundant in the onion and asparagus genomes.

Vitte C, Estep MC, Leebens-Mack J, Bennetzen JL.

Ann Bot. 2013 Sep;112(5):881-9. doi: 10.1093/aob/mct155. Epub 2013 Jul 25.

17.

Exceptional diversity, non-random distribution, and rapid evolution of retroelements in the B73 maize genome.

Baucom RS, Estill JC, Chaparro C, Upshaw N, Jogi A, Deragon JM, Westerman RP, Sanmiguel PJ, Bennetzen JL.

PLoS Genet. 2009 Nov;5(11):e1000732. doi: 10.1371/journal.pgen.1000732. Epub 2009 Nov 20.

18.

TARE1, a mutated Copia-like LTR retrotransposon followed by recent massive amplification in tomato.

Yin H, Liu J, Xu Y, Liu X, Zhang S, Ma J, Du J.

PLoS One. 2013 Jul 4;8(7):e68587. doi: 10.1371/journal.pone.0068587. Print 2013.

19.

Characterization of the LTR retrotransposon repertoire of a plant clade of six diploid and one tetraploid species.

Piednoël M, Carrete-Vega G, Renner SS.

Plant J. 2013 Aug;75(4):699-709. doi: 10.1111/tpj.12233. Epub 2013 Jun 3.

20.

Structural and evolutionary analyses of the Ty3/gypsy group of LTR retrotransposons in the genome of Anopheles gambiae.

Tubío JM, Naveira H, Costas J.

Mol Biol Evol. 2005 Jan;22(1):29-39. Epub 2004 Sep 8.

PMID:
15356275

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