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Items: 1 to 20 of 117

1.

Genome-wide identification and initial characterization of bovine long non-coding RNAs from EST data.

Huang W, Long N, Khatib H.

Anim Genet. 2012 Dec;43(6):674-82. doi: 10.1111/j.1365-2052.2012.02325.x. Epub 2012 Feb 8.

PMID:
22497321
2.

Bovine ncRNAs are abundant, primarily intergenic, conserved and associated with regulatory genes.

Qu Z, Adelson DL.

PLoS One. 2012;7(8):e42638. doi: 10.1371/journal.pone.0042638. Epub 2012 Aug 6.

3.

Characterization of 954 bovine full-CDS cDNA sequences.

Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling WM, Wiedmann RT, Van Tassell CP, Smith TP.

BMC Genomics. 2005 Nov 23;6:166.

4.

Examples of sequence conservation analyses capture a subset of mouse long non-coding RNAs sharing homology with fish conserved genomic elements.

Basu S, Müller F, Sanges R.

BMC Bioinformatics. 2013;14 Suppl 7:S14. doi: 10.1186/1471-2105-14-S7-S14. Epub 2013 Apr 22.

6.

Identification of long non-protein coding RNAs in chicken skeletal muscle using next generation sequencing.

Li T, Wang S, Wu R, Zhou X, Zhu D, Zhang Y.

Genomics. 2012 May;99(5):292-8. doi: 10.1016/j.ygeno.2012.02.003. Epub 2012 Feb 20.

7.

The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression.

Derrien T, Johnson R, Bussotti G, Tanzer A, Djebali S, Tilgner H, Guernec G, Martin D, Merkel A, Knowles DG, Lagarde J, Veeravalli L, Ruan X, Ruan Y, Lassmann T, Carninci P, Brown JB, Lipovich L, Gonzalez JM, Thomas M, Davis CA, Shiekhattar R, Gingeras TR, Hubbard TJ, Notredame C, Harrow J, Guigó R.

Genome Res. 2012 Sep;22(9):1775-89. doi: 10.1101/gr.132159.111.

8.

Systematic transcriptome wide analysis of lncRNA-miRNA interactions.

Jalali S, Bhartiya D, Lalwani MK, Sivasubbu S, Scaria V.

PLoS One. 2013;8(2):e53823. doi: 10.1371/journal.pone.0053823. Epub 2013 Feb 6.

9.

Long non-coding RNAs: a new frontier in the study of human diseases.

Shi X, Sun M, Liu H, Yao Y, Song Y.

Cancer Lett. 2013 Oct 10;339(2):159-66. doi: 10.1016/j.canlet.2013.06.013. Epub 2013 Jun 18. Review.

PMID:
23791884
10.

Long noncoding RNAs in C. elegans.

Nam JW, Bartel DP.

Genome Res. 2012 Dec;22(12):2529-40. doi: 10.1101/gr.140475.112. Epub 2012 Jun 15.

11.

Discovery and characterization of 91 novel transcripts expressed in cattle placenta.

Kumar CG, Larson JH, Band MR, Lewin HA.

BMC Genomics. 2007 May 9;8:113.

12.

Regulatory long non-coding RNA and its functions.

Huang Y, Liu N, Wang JP, Wang YQ, Yu XL, Wang ZB, Cheng XC, Zou Q.

J Physiol Biochem. 2012 Dec;68(4):611-8. doi: 10.1007/s13105-012-0166-y. Epub 2012 Apr 26.

PMID:
22535282
13.

Macro lncRNAs: a new layer of cis-regulatory information in the mammalian genome.

Guenzl PM, Barlow DP.

RNA Biol. 2012 Jun;9(6):731-41. doi: 10.4161/rna.19985. Epub 2012 May 23. Review.

PMID:
22617879
14.

Long non-coding RNAs coordinate cellular responses to stress.

Lakhotia SC.

Wiley Interdiscip Rev RNA. 2012 Nov-Dec;3(6):779-96. doi: 10.1002/wrna.1135. Epub 2012 Sep 13. Review.

PMID:
22976942
15.

Human polymorphisms at long non-coding RNAs (lncRNAs) and association with prostate cancer risk.

Jin G, Sun J, Isaacs SD, Wiley KE, Kim ST, Chu LW, Zhang Z, Zhao H, Zheng SL, Isaacs WB, Xu J.

Carcinogenesis. 2011 Nov;32(11):1655-9. doi: 10.1093/carcin/bgr187. Epub 2011 Aug 19.

16.

[Long non-coding RNAs and their relevance in cancer].

Sána J, Faltejsková P, Svoboda M, Slabý O.

Klin Onkol. 2012;25(4):246-54. Review. Czech.

PMID:
22920164
17.

Transcriptome analysis for Caenorhabditis elegans based on novel expressed sequence tags.

Shin H, Hirst M, Bainbridge MN, Magrini V, Mardis E, Moerman DG, Marra MA, Baillie DL, Jones SJ.

BMC Biol. 2008 Jul 8;6:30. doi: 10.1186/1741-7007-6-30.

18.

Heterogeneous tempo and mode of conserved noncoding sequence evolution among four mammalian orders.

Babarinde IA, Saitou N.

Genome Biol Evol. 2013;5(12):2330-43. doi: 10.1093/gbe/evt177.

19.

Systematic analysis of genomic organization and structure of long non-coding RNAs in the human genome.

Sun J, Zhou M, Mao ZT, Hao DP, Wang ZZ, Li CX.

FEBS Lett. 2013 Apr 2;587(7):976-82. doi: 10.1016/j.febslet.2013.02.036. Epub 2013 Feb 27.

20.

Computational identification and functional predictions of long noncoding RNA in Zea mays.

Boerner S, McGinnis KM.

PLoS One. 2012;7(8):e43047. doi: 10.1371/journal.pone.0043047. Epub 2012 Aug 16.

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