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Items: 1 to 20 of 133

1.

Modelling cyanobacteria: from metabolism to integrative models of phototrophic growth.

Steuer R, Knoop H, Machné R.

J Exp Bot. 2012 Mar;63(6):2259-74. doi: 10.1093/jxb/ers018. Review.

PMID:
22450165
2.

Flux balance analysis of cyanobacterial metabolism: the metabolic network of Synechocystis sp. PCC 6803.

Knoop H, Gründel M, Zilliges Y, Lehmann R, Hoffmann S, Lockau W, Steuer R.

PLoS Comput Biol. 2013;9(6):e1003081. doi: 10.1371/journal.pcbi.1003081. Epub 2013 Jun 27.

3.

Development of Synechocystis sp. PCC 6803 as a phototrophic cell factory.

Yu Y, You L, Liu D, Hollinshead W, Tang YJ, Zhang F.

Mar Drugs. 2013 Aug 13;11(8):2894-916. doi: 10.3390/md11082894. Review.

4.

The metabolic network of Synechocystis sp. PCC 6803: systemic properties of autotrophic growth.

Knoop H, Zilliges Y, Lockau W, Steuer R.

Plant Physiol. 2010 Sep;154(1):410-22. doi: 10.1104/pp.110.157198. Epub 2010 Jul 8.

5.

Flux coupling and transcriptional regulation within the metabolic network of the photosynthetic bacterium Synechocystis sp. PCC6803.

Montagud A, Zelezniak A, Navarro E, de Córdoba PF, Urchueguía JF, Patil KR.

Biotechnol J. 2011 Mar;6(3):330-42. doi: 10.1002/biot.201000109. Epub 2011 Jan 11.

PMID:
21226012
6.

Integrated metabolic flux and omics analysis of Synechocystis sp. PCC 6803 under mixotrophic and photoheterotrophic conditions.

Nakajima T, Kajihata S, Yoshikawa K, Matsuda F, Furusawa C, Hirasawa T, Shimizu H.

Plant Cell Physiol. 2014 Sep;55(9):1605-12. doi: 10.1093/pcp/pcu091. Epub 2014 Jun 26.

PMID:
24969233
7.

Reconstruction and verification of a genome-scale metabolic model for Synechocystis sp. PCC6803.

Yoshikawa K, Kojima Y, Nakajima T, Furusawa C, Hirasawa T, Shimizu H.

Appl Microbiol Biotechnol. 2011 Oct;92(2):347-58. doi: 10.1007/s00253-011-3559-x. Epub 2011 Sep 1.

PMID:
21881889
8.

Flux balance analysis of photoautotrophic metabolism.

Shastri AA, Morgan JA.

Biotechnol Prog. 2005 Nov-Dec;21(6):1617-26.

PMID:
16321043
9.

Diurnal Regulation of Cellular Processes in the Cyanobacterium Synechocystis sp. Strain PCC 6803: Insights from Transcriptomic, Fluxomic, and Physiological Analyses.

Saha R, Liu D, Hoynes-O'Connor A, Liberton M, Yu J, Bhattacharyya-Pakrasi M, Balassy A, Zhang F, Moon TS, Maranas CD, Pakrasi HB.

MBio. 2016 May 3;7(3). pii: e00464-16. doi: 10.1128/mBio.00464-16.

10.

Impaired glycogen synthesis causes metabolic overflow reactions and affects stress responses in the cyanobacterium Synechocystis sp. PCC 6803.

Gründel M, Scheunemann R, Lockau W, Zilliges Y.

Microbiology. 2012 Dec;158(Pt 12):3032-43. doi: 10.1099/mic.0.062950-0. Epub 2012 Oct 4.

PMID:
23038809
11.

Integrative analysis of large scale expression profiles reveals core transcriptional response and coordination between multiple cellular processes in a cyanobacterium.

Singh AK, Elvitigala T, Cameron JC, Ghosh BK, Bhattacharyya-Pakrasi M, Pakrasi HB.

BMC Syst Biol. 2010 Aug 2;4:105. doi: 10.1186/1752-0509-4-105.

12.

Improving photosynthesis and metabolic networks for the competitive production of phototroph-derived biofuels.

Work VH, D'Adamo S, Radakovits R, Jinkerson RE, Posewitz MC.

Curr Opin Biotechnol. 2012 Jun;23(3):290-7. doi: 10.1016/j.copbio.2011.11.022. Epub 2011 Dec 13. Review.

PMID:
22172528
13.

Optimizing cyanobacterial product synthesis: Meeting the challenges.

Zavřel T, Červený J, Knoop H, Steuer R.

Bioengineered. 2016 Nov;7(6):490-496. doi: 10.1080/21655979.2016.1207017. Epub 2016 Jul 15.

14.

The diversity of cyanobacterial metabolism: genome analysis of multiple phototrophic microorganisms.

Beck C, Knoop H, Axmann IM, Steuer R.

BMC Genomics. 2012 Feb 2;13:56. doi: 10.1186/1471-2164-13-56.

15.

A systems biology approach to reconcile metabolic network models with application to Synechocystis sp. PCC 6803 for biofuel production.

Mohammadi R, Fallah-Mehrabadi J, Bidkhori G, Zahiri J, Javad Niroomand M, Masoudi-Nejad A.

Mol Biosyst. 2016 Jul 19;12(8):2552-61. doi: 10.1039/c6mb00119j.

PMID:
27265370
16.

Reconstruction and comparison of the metabolic potential of cyanobacteria Cyanothece sp. ATCC 51142 and Synechocystis sp. PCC 6803.

Saha R, Verseput AT, Berla BM, Mueller TJ, Pakrasi HB, Maranas CD.

PLoS One. 2012;7(10):e48285. doi: 10.1371/journal.pone.0048285. Epub 2012 Oct 31.

17.

A model of the circadian clock in the cyanobacterium Cyanothece sp. ATCC 51142.

Vinh NX, Chetty M, Coppel R, Gaudana S, Wangikar PP.

BMC Bioinformatics. 2013;14 Suppl 2:S14. doi: 10.1186/1471-2105-14-S2-S14. Epub 2013 Jan 21.

18.

Quantitative iTRAQ LC-MS/MS proteomics reveals metabolic responses to biofuel ethanol in cyanobacterial Synechocystis sp. PCC 6803.

Qiao J, Wang J, Chen L, Tian X, Huang S, Ren X, Zhang W.

J Proteome Res. 2012 Nov 2;11(11):5286-300. doi: 10.1021/pr300504w. Epub 2012 Oct 23.

PMID:
23062023
19.

Cross-talk between photomixotrophic growth and CO(2) -concentrating mechanism in Synechocystis sp. strain PCC 6803.

Haimovich-Dayan M, Kahlon S, Hihara Y, Hagemann M, Ogawa T, Ohad I, Lieman-Hurwitz J, Kaplan A.

Environ Microbiol. 2011 Jul;13(7):1767-77. doi: 10.1111/j.1462-2920.2011.02481.x. Epub 2011 Apr 25.

PMID:
21518213
20.

Nutrient acquisition and limitation for the photoautotrophic growth of Synechocystis sp. PCC6803 as a renewable biomass source.

Kim HW, Vannela R, Zhou C, Rittmann BE.

Biotechnol Bioeng. 2011 Feb;108(2):277-85. doi: 10.1002/bit.22928.

PMID:
20824682

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