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Lexical patterns, features and knowledge resources for coreference resolution in clinical notes.

Gooch P, Roudsari A.

J Biomed Inform. 2012 Oct;45(5):901-12. doi: 10.1016/j.jbi.2012.02.012. Epub 2012 Mar 17.


Coreference resolution: a review of general methodologies and applications in the clinical domain.

Zheng J, Chapman WW, Crowley RS, Savova GK.

J Biomed Inform. 2011 Dec;44(6):1113-22. doi: 10.1016/j.jbi.2011.08.006. Epub 2011 Aug 12. Review.


A supervised framework for resolving coreference in clinical records.

Rink B, Roberts K, Harabagiu SM.

J Am Med Inform Assoc. 2012 Sep-Oct;19(5):875-82. doi: 10.1136/amiajnl-2012-000810. Epub 2012 May 19.


Evaluating the state of the art in coreference resolution for electronic medical records.

Uzuner O, Bodnari A, Shen S, Forbush T, Pestian J, South BR.

J Am Med Inform Assoc. 2012 Sep-Oct;19(5):786-91. doi: 10.1136/amiajnl-2011-000784. Epub 2012 Feb 24. Review.


Using domain knowledge and domain-inspired discourse model for coreference resolution for clinical narratives.

Jindal P, Roth D.

J Am Med Inform Assoc. 2013 Mar-Apr;20(2):356-62. doi: 10.1136/amiajnl-2011-000767. Epub 2012 Jul 10.


A system for coreference resolution for the clinical narrative.

Zheng J, Chapman WW, Miller TA, Lin C, Crowley RS, Savova GK.

J Am Med Inform Assoc. 2012 Jul-Aug;19(4):660-7. doi: 10.1136/amiajnl-2011-000599. Epub 2012 Jan 31.


Bio-SCoRes: A Smorgasbord Architecture for Coreference Resolution in Biomedical Text.

Kilicoglu H, Demner-Fushman D.

PLoS One. 2016 Mar 2;11(3):e0148538. doi: 10.1371/journal.pone.0148538. eCollection 2016.


A classification approach to coreference in discharge summaries: 2011 i2b2 challenge.

Xu Y, Liu J, Wu J, Wang Y, Tu Z, Sun JT, Tsujii J, Chang EI.

J Am Med Inform Assoc. 2012 Sep-Oct;19(5):897-905. doi: 10.1136/amiajnl-2011-000734. Epub 2012 Apr 13.


A categorical analysis of coreference resolution errors in biomedical texts.

Choi M, Zobel J, Verspoor K.

J Biomed Inform. 2016 Apr;60:309-18. doi: 10.1016/j.jbi.2016.02.015. Epub 2016 Feb 27.


Coreference analysis in clinical notes: a multi-pass sieve with alternate anaphora resolution modules.

Jonnalagadda SR, Li D, Sohn S, Wu ST, Wagholikar K, Torii M, Liu H.

J Am Med Inform Assoc. 2012 Sep-Oct;19(5):867-74. doi: 10.1136/amiajnl-2011-000766. Epub 2012 Jun 16.


Recognizing names in biomedical texts: a machine learning approach.

Zhou G, Zhang J, Su J, Shen D, Tan C.

Bioinformatics. 2004 May 1;20(7):1178-90. Epub 2004 Feb 10.


MCORES: a system for noun phrase coreference resolution for clinical records.

Bodnari A, Szolovits P, Uzuner Ö.

J Am Med Inform Assoc. 2012 Sep-Oct;19(5):906-12. doi: 10.1136/amiajnl-2011-000591. Epub 2012 Mar 14.


Medication information extraction with linguistic pattern matching and semantic rules.

Spasic I, Sarafraz F, Keane JA, Nenadic G.

J Am Med Inform Assoc. 2010 Sep-Oct;17(5):532-5. doi: 10.1136/jamia.2010.003657.


Roogle: an information retrieval engine for clinical data warehouse.

Cuggia M, Garcelon N, Campillo-Gimenez B, Bernicot T, Laurent JF, Garin E, Happe A, Duvauferrier R.

Stud Health Technol Inform. 2011;169:584-8.


Secondary use of electronic health records for building cohort studies through top-down information extraction.

Kreuzthaler M, Schulz S, Berghold A.

J Biomed Inform. 2015 Feb;53:188-95. doi: 10.1016/j.jbi.2014.10.010. Epub 2014 Nov 21.


High accuracy information extraction of medication information from clinical notes: 2009 i2b2 medication extraction challenge.

Patrick J, Li M.

J Am Med Inform Assoc. 2010 Sep-Oct;17(5):524-7. doi: 10.1136/jamia.2010.003939.


Populating the i2b2 database with heterogeneous EMR data: a semantic network approach.

Mate S, Bürkle T, Köpcke F, Breil B, Wullich B, Dugas M, Prokosch HU, Ganslandt T.

Stud Health Technol Inform. 2011;169:502-6.


Rule-based information extraction from patients' clinical data.

Mykowiecka A, Marciniak M, Kupść A.

J Biomed Inform. 2009 Oct;42(5):923-36. doi: 10.1016/j.jbi.2009.07.007. Epub 2009 Jul 29.


Integrating existing natural language processing tools for medication extraction from discharge summaries.

Doan S, Bastarache L, Klimkowski S, Denny JC, Xu H.

J Am Med Inform Assoc. 2010 Sep-Oct;17(5):528-31. doi: 10.1136/jamia.2010.003855.


Automatic identification of critical follow-up recommendation sentences in radiology reports.

Yetisgen-Yildiz M, Gunn ML, Xia F, Payne TH.

AMIA Annu Symp Proc. 2011;2011:1593-602. Epub 2011 Oct 22.

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