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Items: 1 to 20 of 135

1.

The mouse-human anatomy ontology mapping project.

Hayamizu TF, de Coronado S, Fragoso G, Sioutos N, Kadin JA, Ringwald M.

Database (Oxford). 2012 Mar 20;2012:bar066. doi: 10.1093/database/bar066. Print 2012.

3.

Of mice and men: aligning mouse and human anatomies.

Bodenreider O, Hayamizu TF, Ringwald M, De Coronado S, Zhang S.

AMIA Annu Symp Proc. 2005:61-5.

4.

The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data.

Köhler S, Doelken SC, Mungall CJ, Bauer S, Firth HV, Bailleul-Forestier I, Black GC, Brown DL, Brudno M, Campbell J, FitzPatrick DR, Eppig JT, Jackson AP, Freson K, Girdea M, Helbig I, Hurst JA, Jähn J, Jackson LG, Kelly AM, Ledbetter DH, Mansour S, Martin CL, Moss C, Mumford A, Ouwehand WH, Park SM, Riggs ER, Scott RH, Sisodiya S, Van Vooren S, Wapner RJ, Wilkie AO, Wright CF, Vulto-van Silfhout AT, de Leeuw N, de Vries BB, Washingthon NL, Smith CL, Westerfield M, Schofield P, Ruef BJ, Gkoutos GV, Haendel M, Smedley D, Lewis SE, Robinson PN.

Nucleic Acids Res. 2014 Jan;42(Database issue):D966-74. doi: 10.1093/nar/gkt1026. Epub 2013 Nov 11.

5.

The teleost anatomy ontology: anatomical representation for the genomics age.

Dahdul WM, Lundberg JG, Midford PE, Balhoff JP, Lapp H, Vision TJ, Haendel MA, Westerfield M, Mabee PM.

Syst Biol. 2010 Jul;59(4):369-83. doi: 10.1093/sysbio/syq013. Epub 2010 Mar 29.

6.

Providing visualisation support for the analysis of anatomy ontology data.

Dadzie AS, Burger A.

BMC Bioinformatics. 2005 Mar 24;6:74.

7.

Anatomical reasoning in the informatics age: Principles, ontologies, and agendas.

Trelease RB.

Anat Rec B New Anat. 2006 Mar;289(2):72-84. Review.

8.

Formalizing concepts of species, sex and developmental stage in anatomical ontologies.

Aitken S.

Bioinformatics. 2005 Jun 1;21(11):2773-9. Epub 2005 Mar 29.

PMID:
15797906
9.

Experience in Aligning Anatomical Ontologies.

Zhang S, Bodenreider O.

Int J Semant Web Inf Syst. 2007;3(2):1-26.

10.

Anatomy ontologies and potential users: bridging the gap.

Travillian RS, Adamusiak T, Burdett T, Gruenberger M, Hancock J, Mallon AM, Malone J, Schofield P, Parkinson H.

J Biomed Semantics. 2011 Aug 9;2 Suppl 4:S3. doi: 10.1186/2041-1480-2-S4-S3. Epub 2011 Aug 9.

11.

A gross anatomy ontology for hymenoptera.

Yoder MJ, Mikó I, Seltmann KC, Bertone MA, Deans AR.

PLoS One. 2010 Dec 29;5(12):e15991. doi: 10.1371/journal.pone.0015991.

12.

Unintended consequences of existential quantifications in biomedical ontologies.

Boeker M, Tudose I, Hastings J, Schober D, Schulz S.

BMC Bioinformatics. 2011 Nov 24;12:456. doi: 10.1186/1471-2105-12-456.

13.

Disease Ontology: a backbone for disease semantic integration.

Schriml LM, Arze C, Nadendla S, Chang YW, Mazaitis M, Felix V, Feng G, Kibbe WA.

Nucleic Acids Res. 2012 Jan;40(Database issue):D940-6. doi: 10.1093/nar/gkr972. Epub 2011 Nov 12.

14.

Searching the Mouse Genome Informatics (MGI) resources for information on mouse biology from genotype to phenotype.

Shaw DR.

Curr Protoc Bioinformatics. 2009 Mar;Chapter 1:Unit1.7. doi: 10.1002/0471250953.bi0107s25.

PMID:
19274630
15.

Mouse anatomy ontologies: enhancements and tools for exploring and integrating biomedical data.

Hayamizu TF, Baldock RA, Ringwald M.

Mamm Genome. 2015 Oct;26(9-10):422-30. doi: 10.1007/s00335-015-9584-9. Epub 2015 Jul 25.

16.

The AEO, an Ontology of Anatomical Entities for Classifying Animal Tissues and Organs.

Bard JB.

Front Genet. 2012 Feb 14;3:18. doi: 10.3389/fgene.2012.00018. eCollection 2012.

17.

Comparing the representation of anatomy in the FMA and SNOMED CT.

Bodenreider O, Zhang S.

AMIA Annu Symp Proc. 2006:46-50.

18.

Searching the Mouse Genome Informatics (MGI) Resources for Information on Mouse Biology from Genotype to Phenotype.

Shaw DR.

Curr Protoc Bioinformatics. 2016 Dec 8;56:1.7.1-1.7.16. doi: 10.1002/cpbi.18.

19.

The mouse genome database (MGD): new features facilitating a model system.

Eppig JT, Blake JA, Bult CJ, Kadin JA, Richardson JE; Mouse Genome Database Group.

Nucleic Acids Res. 2007 Jan;35(Database issue):D630-7. Epub 2006 Nov 29.

20.

An ontology for Xenopus anatomy and development.

Segerdell E, Bowes JB, Pollet N, Vize PD.

BMC Dev Biol. 2008 Sep 25;8:92. doi: 10.1186/1471-213X-8-92.

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