Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 90

1.

Molecular probe technology detects bacteria without culture.

Hyman RW, St Onge RP, Kim H, Tamaresis JS, Miranda M, Aparicio AM, Fukushima M, Pourmand N, Giudice LC, Davis RW.

BMC Microbiol. 2012 Mar 9;12:29. doi: 10.1186/1471-2180-12-29.

2.

Targeted and highly multiplexed detection of microorganisms by employing an ensemble of molecular probes.

Xu W, Krishnakumar S, Miranda M, Jensen MA, Fukushima M, Palm C, Fung E, Davis RW, St Onge RP, Hyman RW.

Appl Environ Microbiol. 2014 Jul;80(14):4153-61. doi: 10.1128/AEM.00666-14. Epub 2014 May 2.

3.

Multiplex identification of microbes.

Hyman RW, St Onge RP, Allen EA, Miranda M, Aparicio AM, Fukushima M, Davis RW.

Appl Environ Microbiol. 2010 Jun;76(12):3904-10. doi: 10.1128/AEM.02785-09. Epub 2010 Apr 23.

4.

A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat.

Alberts R, Terpstra P, Hardonk M, Bystrykh LV, de Haan G, Breitling R, Nap JP, Jansen RC.

BMC Bioinformatics. 2007 Apr 20;8:132.

5.

Selecting signature oligonucleotides to identify organisms using DNA arrays.

Kaderali L, Schliep A.

Bioinformatics. 2002 Oct;18(10):1340-9.

PMID:
12376378
6.

Fluorescence in situ hybridization for the identification of environmental microbes.

Pernthaler A, Pernthaler J.

Methods Mol Biol. 2007;353:153-64.

PMID:
17332640
7.

Fluorescent microsphere-based readout technology for multiplexed human single nucleotide polymorphism analysis and bacterial identification.

Ye F, Li MS, Taylor JD, Nguyen Q, Colton HM, Casey WM, Wagner M, Weiner MP, Chen J.

Hum Mutat. 2001 Apr;17(4):305-16.

PMID:
11295829
8.

[Rapid diagnosis of common pathogenic bacteria infection in newborn infants by 16SrDNA oligonucleotide array].

Shen DX, Du J, Feng ZC.

Zhonghua Er Ke Za Zhi. 2004 Sep;42(9):668-72. Chinese.

PMID:
15482667
9.

Multiplex detection of bacteria associated with normal microbiota and with bacterial vaginosis in vaginal swabs by use of oligonucleotide-coupled fluorescent microspheres.

Dumonceaux TJ, Schellenberg J, Goleski V, Hill JE, Jaoko W, Kimani J, Money D, Ball TB, Plummer FA, Severini A.

J Clin Microbiol. 2009 Dec;47(12):4067-77. doi: 10.1128/JCM.00112-09. Epub 2009 Sep 30.

10.

Use of a DNA microarray for detection and identification of bacterial pathogens associated with fishery products.

Cao B, Li R, Xiong S, Yao F, Liu X, Wang M, Feng L, Wang L.

Appl Environ Microbiol. 2011 Dec;77(23):8219-25. doi: 10.1128/AEM.05914-11. Epub 2011 Sep 30.

11.

PathogenMIPer: a tool for the design of molecular inversion probes to detect multiple pathogens.

Thiyagarajan S, Karhanek M, Akhras M, Davis RW, Pourmand N.

BMC Bioinformatics. 2006 Nov 14;7:500.

12.

Multiplexed genotyping with sequence-tagged molecular inversion probes.

Hardenbol P, Banér J, Jain M, Nilsson M, Namsaraev EA, Karlin-Neumann GA, Fakhrai-Rad H, Ronaghi M, Willis TD, Landegren U, Davis RW.

Nat Biotechnol. 2003 Jun;21(6):673-8. Epub 2003 May 5.

PMID:
12730666
13.

A novel, multiplex, real-time PCR-based approach for the detection of the commonly occurring pathogenic fungi and bacteria.

Horváth Á, Pető Z, Urbán E, Vágvölgyi C, Somogyvári F.

BMC Microbiol. 2013 Dec 23;13:300. doi: 10.1186/1471-2180-13-300.

14.

A statistical method for predicting splice variants between two groups of samples using GeneChip expression array data.

Fan W, Khalid N, Hallahan AR, Olson JM, Zhao LP.

Theor Biol Med Model. 2006 Apr 7;3:19.

15.

Application of resequencing microarrays in microbial detection and characterization.

Leski TA, Lin B, Malanoski AP, Stenger DA.

Future Microbiol. 2012 May;7(5):625-37. doi: 10.2217/fmb.12.30. Review.

PMID:
22568717
16.

[A novel oligonucleotide arrays-based multiplex amplifiable probe hybridization technology].

Liu HP, Wang H, Lu ZH, Liu XP, Xia K, Xia JH.

Yi Chuan Xue Bao. 2004 Feb;31(2):119-24. Chinese.

PMID:
15473300
17.

Multiplex detection of bacteria in complex clinical and environmental samples using oligonucleotide-coupled fluorescent microspheres.

Dumonceaux TJ, Town JR, Hill JE, Chaban BL, Hemmingsen SM.

J Vis Exp. 2011 Oct 23;(56). pii: 3344. doi: 10.3791/3344.

18.

E-probe Diagnostic Nucleic acid Analysis (EDNA): a theoretical approach for handling of next generation sequencing data for diagnostics.

Stobbe AH, Daniels J, Espindola AS, Verma R, Melcher U, Ochoa-Corona F, Garzon C, Fletcher J, Schneider W.

J Microbiol Methods. 2013 Sep;94(3):356-66. doi: 10.1016/j.mimet.2013.07.002. Epub 2013 Jul 16.

PMID:
23867249
19.

Oligonucleotide microarrays for identification of microbial pathogens and detection of their virulence-associated or drug-resistance determinants.

Volokhov DV, Kong H, Herold K, Chizhikov VE, Rasooly A.

Methods Mol Biol. 2011;671:55-94. doi: 10.1007/978-1-59745-551-0_3.

PMID:
20967623
20.

Quantitative, multiplexed detection of Salmonella and other pathogens by Luminex xMAP suspension array.

Dunbar SA, Jacobson JW.

Methods Mol Biol. 2007;394:1-19. doi: 10.1007/978-1-59745-512-1_1.

PMID:
18363228

Supplemental Content

Support Center