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Items: 1 to 20 of 60

1.

Partitioning transcript variation in Drosophila: abundance, isoforms, and alleles.

Yang Y, Graze RM, Walts BM, Lopez CM, Baker HV, Wayne ML, Nuzhdin SV, McIntyre LM.

G3 (Bethesda). 2011 Nov;1(6):427-36. doi: 10.1534/g3.111.000596. Epub 2011 Nov 1.

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Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.

Ha KCh, Coulombe-Huntington J, Majewski J.

BMC Genomics. 2009 Nov 12;10:519. doi: 10.1186/1471-2164-10-519.

5.

Natural variation of gene models in Drosophila melanogaster.

Kurmangaliyev YZ, Favorov AV, Osman NM, Lehmann KV, Campo D, Salomon MP, Tower J, Gelfand MS, Nuzhdin SV.

BMC Genomics. 2015 Mar 17;16:198. doi: 10.1186/s12864-015-1415-6.

6.

The impact of shared ancestral variation on hybrid male lethality--a 16 codon indel in the Drosophila simulans Lhr gene.

Nolte V, Weigel D, Schlötterer C.

J Evol Biol. 2008 Mar;21(2):551-5. doi: 10.1111/j.1420-9101.2007.01486.x. Epub 2008 Jan 9.

8.

Common pattern of evolution of gene expression level and protein sequence in Drosophila.

Nuzhdin SV, Wayne ML, Harmon KL, McIntyre LM.

Mol Biol Evol. 2004 Jul;21(7):1308-17. Epub 2004 Mar 19.

PMID:
15034135
9.

Somatic sex-specific transcriptome differences in Drosophila revealed by whole transcriptome sequencing.

Chang PL, Dunham JP, Nuzhdin SV, Arbeitman MN.

BMC Genomics. 2011 Jul 14;12:364. doi: 10.1186/1471-2164-12-364.

10.

Regulatory divergence in Drosophila melanogaster and D. simulans, a genomewide analysis of allele-specific expression.

Graze RM, McIntyre LM, Main BJ, Wayne ML, Nuzhdin SV.

Genetics. 2009 Oct;183(2):547-61, 1SI-21SI. doi: 10.1534/genetics.109.105957. Epub 2009 Aug 10.

11.

A statistical method for predicting splice variants between two groups of samples using GeneChip expression array data.

Fan W, Khalid N, Hallahan AR, Olson JM, Zhao LP.

Theor Biol Med Model. 2006 Apr 7;3:19.

12.

Drosophila melanogaster males respond differently at the behavioural and genome-wide levels to Drosophila melanogaster and Drosophila simulans females.

Ellis LL, Carney GE.

J Evol Biol. 2009 Nov;22(11):2183-91. doi: 10.1111/j.1420-9101.2009.01834.x. Epub 2009 Sep 18.

13.

Detecting imbalanced expression of SNP alleles by minisequencing on microarrays.

Liljedahl U, Fredriksson M, Dahlgren A, Syvänen AC.

BMC Biotechnol. 2004 Oct 22;4:24.

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A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays.

Xiao Y, Segal MR, Yang YH, Yeh RF.

Bioinformatics. 2007 Jun 15;23(12):1459-67. Epub 2007 Apr 25.

PMID:
17459966
18.

Abundant genetic variability in Drosophila simulans for hybrid female lethality in interspecific crosses to Drosophila melanogaster.

Gérard PR, Presgraves DC.

Genet Res (Camb). 2012 Feb;94(1):1-7. doi: 10.1017/S0016672312000031.

PMID:
22353244
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