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Items: 1 to 20 of 103


Identification of microRNA-regulated gene networks by expression analysis of target genes.

Gennarino VA, D'Angelo G, Dharmalingam G, Fernandez S, Russolillo G, Sanges R, Mutarelli M, Belcastro V, Ballabio A, Verde P, Sardiello M, Banfi S.

Genome Res. 2012 Jun;22(6):1163-72. doi: 10.1101/gr.130435.111.


An in silico analysis of dynamic changes in microRNA expression profiles in stepwise development of nasopharyngeal carcinoma.

Luo Z, Zhang L, Li Z, Li X, Li G, Yu H, Jiang C, Dai Y, Guo X, Xiang J, Li G.

BMC Med Genomics. 2012 Jan 19;5:3. doi: 10.1186/1755-8794-5-3.


Integrated analyses to reconstruct microRNA-mediated regulatory networks in mouse liver using high-throughput profiling.

Hsu SD, Huang HY, Chou CH, Sun YM, Hsu MT, Tsou AP.

BMC Genomics. 2015;16 Suppl 2:S12. doi: 10.1186/1471-2164-16-S2-S12.


Inferring the perturbed microRNA regulatory networks from gene expression data using a network propagation based method.

Wang T, Gu J, Li Y.

BMC Bioinformatics. 2014 Jul 29;15:255. doi: 10.1186/1471-2105-15-255.


Uncovering MicroRNA and Transcription Factor Mediated Regulatory Networks in Glioblastoma.

Sun J, Gong X, Purow B, Zhao Z.

PLoS Comput Biol. 2012;8(7):e1002488. doi: 10.1371/journal.pcbi.1002488.


Inferring the perturbed microRNA regulatory networks in cancer using hierarchical gene co-expression signatures.

Gu J, Xuan Z.

PLoS One. 2013 Nov 20;8(11):e81032. doi: 10.1371/journal.pone.0081032.


A densely interconnected genome-wide network of microRNAs and oncogenic pathways revealed using gene expression signatures.

Ooi CH, Oh HK, Wang HZ, Tan AL, Wu J, Lee M, Rha SY, Chung HC, Virshup DM, Tan P.

PLoS Genet. 2011 Dec;7(12):e1002415. doi: 10.1371/journal.pgen.1002415.


Reproducible combinatorial regulatory networks elucidate novel oncogenic microRNAs in non-small cell lung cancer.

Mitra R, Edmonds MD, Sun J, Zhao M, Yu H, Eischen CM, Zhao Z.

RNA. 2014 Sep;20(9):1356-68. doi: 10.1261/rna.042754.113.


Microarray and deep sequencing cross-platform analysis of the mirRNome and isomiR variation in response to epidermal growth factor.

Llorens F, Hummel M, Pantano L, Pastor X, Vivancos A, Castillo E, Mattlin H, Ferrer A, Ingham M, Noguera M, Kofler R, Dohm JC, Pluvinet R, Bayés M, Himmelbauer H, del Rio JA, Martí E, Sumoy L.

BMC Genomics. 2013 Jun 1;14:371. doi: 10.1186/1471-2164-14-371.


Temporal analysis of reciprocal miRNA-mRNA expression patterns predicts regulatory networks during differentiation in human skeletal muscle cells.

Sjögren RJ, Egan B, Katayama M, Zierath JR, Krook A.

Physiol Genomics. 2015 Mar;47(3):45-57. doi: 10.1152/physiolgenomics.00037.2014.


Bioinformatics analysis of microRNA comprehensive regulatory network in congenital microtia.

Wei G.

Int J Pediatr Otorhinolaryngol. 2015 Oct;79(10):1727-31. doi: 10.1016/j.ijporl.2015.07.036.


miRFANs: an integrated database for Arabidopsis thaliana microRNA function annotations.

Liu H, Jin T, Liao R, Wan L, Xu B, Zhou S, Guan J.

BMC Plant Biol. 2012 May 14;12:68. doi: 10.1186/1471-2229-12-68.


Reconstruction of temporal activity of microRNAs from gene expression data in breast cancer cell line.

Jayavelu ND, Bar N.

BMC Genomics. 2015 Dec 18;16:1077. doi: 10.1186/s12864-015-2260-3.


MicroRNA network analysis identifies key microRNAs and genes associated with precancerous lesions of gastric cancer.

Wang XW, Wu Y, Wang D, Qin ZF.

Genet Mol Res. 2014 Oct 27;13(4):8695-703. doi: 10.4238/2014.October.27.10.


Identification and characterization of FGF2-dependent mRNA: microRNA networks during lens fiber cell differentiation.

Wolf L, Gao CS, Gueta K, Xie Q, Chevallier T, Podduturi NR, Sun J, Conte I, Zelenka PS, Ashery-Padan R, Zavadil J, Cvekl A.

G3 (Bethesda). 2013 Dec 9;3(12):2239-55. doi: 10.1534/g3.113.008698.


MicroRNA expression signature for Satb2-induced osteogenic differentiation in bone marrow stromal cells.

Gong Y, Xu F, Zhang L, Qian Y, Chen J, Huang H, Yu Y.

Mol Cell Biochem. 2014 Feb;387(1-2):227-39. doi: 10.1007/s11010-013-1888-z.


Network-Based Approaches to Understand the Roles of miR-200 and Other microRNAs in Cancer.

Bracken CP, Khew-Goodall Y, Goodall GJ.

Cancer Res. 2015 Jul 1;75(13):2594-9. doi: 10.1158/0008-5472.CAN-15-0287. Review.


miRNA and cancer; computational and experimental approaches.

Tutar Y.

Curr Pharm Biotechnol. 2014;15(5):429.


Characterization of regulatory features of housekeeping and tissue-specific regulators within tissue regulatory networks.

Li P, Hua X, Zhang Z, Li J, Wang J.

BMC Syst Biol. 2013 Oct 31;7:112. doi: 10.1186/1752-0509-7-112.

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