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Items: 1 to 20 of 86

1.

The application and performance of single nucleotide polymorphism markers for population genetic analyses of lepidoptera.

Coates BS, Bayles DO, Wanner KW, Robertson HM, Hellmich RL, Sappington TW.

Front Genet. 2011 Jun 29;2:38. doi: 10.3389/fgene.2011.00038.

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4.

Comparative performance of single nucleotide polymorphism and microsatellite markers for population genetic analysis.

Coates BS, Sumerford DV, Miller NJ, Kim KS, Sappington TW, Siegfried BD, Lewis LC.

J Hered. 2009 Sep-Oct;100(5):556-64. doi: 10.1093/jhered/esp028.

PMID:
19525239
5.

The first set of EST resource for gene discovery and marker development in pigeonpea (Cajanus cajan L.).

Raju NL, Gnanesh BN, Lekha P, Jayashree B, Pande S, Hiremath PJ, Byregowda M, Singh NK, Varshney RK.

BMC Plant Biol. 2010 Mar 11;10:45. doi: 10.1186/1471-2229-10-45.

6.

Mining an Ostrinia nubilalis midgut expressed sequence tag (EST) library for candidate genes and single nucleotide polymorphisms (SNPs).

Coates BS, Sumerford DV, Hellmich RL, Lewis LC.

Insect Mol Biol. 2008 Dec;17(6):607-20. doi: 10.1111/j.1365-2583.2008.00833.x.

PMID:
19133073
7.

Development and validation of single nucleotide polymorphism markers in Odontobutis potamophila from transcriptomic sequencing.

Zhang HW, Yin SW, Zhang LJ, Hou XY, Wang YY, Zhang GS.

Genet Mol Res. 2015 Mar 20;14(1):2080-5. doi: 10.4238/2015.March.20.18.

8.

PERMANENT GENETIC RESOURCES: Isolation and characterization of microsatellite loci from the European corn borer, Ostrinia nubilalis (Hübner) (Insecta: Lepidoptera: Crambidae).

Kim KS, Coates BS, Hellmich RL, Sumerford DV, Sappington TW.

Mol Ecol Resour. 2008 Mar;8(2):409-11. doi: 10.1111/j.1471-8286.2007.01974.x.

PMID:
21585805
9.

EST, COSII, and arbitrary gene markers give similar estimates of nucleotide diversity in cultivated tomato (Solanum lycopersicum L.).

Labate JA, Robertson LD, Wu F, Tanksley SD, Baldo AM.

Theor Appl Genet. 2009 Mar;118(5):1005-14. doi: 10.1007/s00122-008-0957-2.

PMID:
19153710
11.

Genetic diversity analysis of elite European maize (Zea mays L.) inbred lines using AFLP, SSR, and SNP markers reveals ascertainment bias for a subset of SNPs.

Frascaroli E, Schrag TA, Melchinger AE.

Theor Appl Genet. 2013 Jan;126(1):133-41. doi: 10.1007/s00122-012-1968-6.

PMID:
22945268
12.

Transcriptome sequencing, and rapid development and application of SNP markers for the legume pod borer Maruca vitrata (Lepidoptera: Crambidae).

Margam VM, Coates BS, Bayles DO, Hellmich RL, Agunbiade T, Seufferheld MJ, Sun W, Kroemer JA, Ba MN, Binso-Dabire CL, Baoua I, Ishiyaku MF, Covas FG, Srinivasan R, Armstrong J, Murdock LL, Pittendrigh BR.

PLoS One. 2011;6(7):e21388. doi: 10.1371/journal.pone.0021388.

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14.

A single major QTL controls expression of larval Cry1F resistance trait in Ostrinia nubilalis (Lepidoptera: Crambidae) and is independent of midgut receptor genes.

Coates BS, Sumerford DV, Lopez MD, Wang H, Fraser LM, Kroemer JA, Spencer T, Kim KS, Abel CA, Hellmich RL, Siegfried BD.

Genetica. 2011 Aug;139(8):961-72. doi: 10.1007/s10709-011-9590-0.

PMID:
21822602
15.

Identification and characterisation of novel SNP markers in Atlantic cod: evidence for directional selection.

Moen T, Hayes B, Nilsen F, Delghandi M, Fjalestad KT, Fevolden SE, Berg PR, Lien S.

BMC Genet. 2008 Feb 26;9:18. doi: 10.1186/1471-2156-9-18.

16.

How do SNP ascertainment schemes and population demographics affect inferences about population history?

McTavish EJ, Hillis DM.

BMC Genomics. 2015 Apr 3;16:266. doi: 10.1186/s12864-015-1469-5.

17.

Comparative analysis of population genetic structure in Athyrium distentifolium (Pteridophyta) using AFLPs and SSRs from anonymous and transcribed gene regions.

Woodhead M, Russell J, Squirrell J, Hollingsworth PM, Mackenzie K, Gibby M, Powell W.

Mol Ecol. 2005 May;14(6):1681-95.

PMID:
15836642
18.

Characterization of novel microsatellite markers for Hyphantria cunea and implications for other Lepidoptera.

Cao LJ, Wen JB, Wei SJ, Liu J, Yang F, Chen M.

Bull Entomol Res. 2015 Jun;105(3):273-84. doi: 10.1017/S0007485315000061.

PMID:
25772405
19.

Rapid gene-based SNP and haplotype marker development in non-model eukaryotes using 3'UTR sequencing.

Koepke T, Schaeffer S, Krishnan V, Jiwan D, Harper A, Whiting M, Oraguzie N, Dhingra A.

BMC Genomics. 2012 Jan 12;13:18. doi: 10.1186/1471-2164-13-18.

20.

Linkage mapping bovine EST-based SNP.

Snelling WM, Casas E, Stone RT, Keele JW, Harhay GP, Bennett GL, Smith TP.

BMC Genomics. 2005 May 19;6:74.

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