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Items: 1 to 20 of 136

1.

Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture.

Rohland N, Reich D.

Genome Res. 2012 May;22(5):939-46. doi: 10.1101/gr.128124.111. Epub 2012 Jan 20.

2.

A cost-effective method for high-throughput construction of illumina sequencing libraries.

Dunham JP, Friesen ML.

Cold Spring Harb Protoc. 2013 Sep 1;2013(9):820-34. doi: 10.1101/pdb.prot074187.

3.

Pre-capture multiplexing improves efficiency and cost-effectiveness of targeted genomic enrichment.

Shearer AE, Hildebrand MS, Ravi H, Joshi S, Guiffre AC, Novak B, Happe S, LeProust EM, Smith RJ.

BMC Genomics. 2012 Nov 14;13:618. doi: 10.1186/1471-2164-13-618.

4.

A novel method for the multiplexed target enrichment of MinION next generation sequencing libraries using PCR-generated baits.

Karamitros T, Magiorkinis G.

Nucleic Acids Res. 2015 Dec 15;43(22):e152. doi: 10.1093/nar/gkv773. Epub 2015 Aug 3.

5.

The Illumina-solexa sequencing protocol for bacterial genomes.

Hu Z, Cheng L, Wang H.

Methods Mol Biol. 2015;1231:91-7. doi: 10.1007/978-1-4939-1720-4_6.

PMID:
25343860
6.

Inexpensive multiplexed library preparation for megabase-sized genomes.

Baym M, Kryazhimskiy S, Lieberman TD, Chung H, Desai MM, Kishony R.

PLoS One. 2015 May 22;10(5):e0128036. doi: 10.1371/journal.pone.0128036. eCollection 2015. Erratum in: PLoS One. 2015;10(6):e0131262.

7.

Pulling out the 1%: whole-genome capture for the targeted enrichment of ancient DNA sequencing libraries.

Carpenter ML, Buenrostro JD, Valdiosera C, Schroeder H, Allentoft ME, Sikora M, Rasmussen M, Gravel S, Guillén S, Nekhrizov G, Leshtakov K, Dimitrova D, Theodossiev N, Pettener D, Luiselli D, Sandoval K, Moreno-Estrada A, Li Y, Wang J, Gilbert MT, Willerslev E, Greenleaf WJ, Bustamante CD.

Am J Hum Genet. 2013 Nov 7;93(5):852-64. doi: 10.1016/j.ajhg.2013.10.002. Epub 2013 Oct 25.

8.

Library preparation and multiplex capture for massive parallel sequencing applications made efficient and easy.

Neiman M, Sundling S, Grönberg H, Hall P, Czene K, Lindberg J, Klevebring D.

PLoS One. 2012;7(11):e48616. doi: 10.1371/journal.pone.0048616. Epub 2012 Nov 5.

9.

Whole-genome haplotyping by dilution, amplification, and sequencing.

Kaper F, Swamy S, Klotzle B, Munchel S, Cottrell J, Bibikova M, Chuang HY, Kruglyak S, Ronaghi M, Eberle MA, Fan JB.

Proc Natl Acad Sci U S A. 2013 Apr 2;110(14):5552-7. doi: 10.1073/pnas.1218696110. Epub 2013 Mar 18.

10.

Illumina sequencing library preparation for highly multiplexed target capture and sequencing.

Meyer M, Kircher M.

Cold Spring Harb Protoc. 2010 Jun;2010(6):pdb.prot5448. doi: 10.1101/pdb.prot5448.

PMID:
20516186
11.

Accurate detection of subclonal single nucleotide variants in whole genome amplified and pooled cancer samples using HaloPlex target enrichment.

Berglund EC, Lindqvist CM, Hayat S, Övernäs E, Henriksson N, Nordlund J, Wahlberg P, Forestier E, Lönnerholm G, Syvänen AC.

BMC Genomics. 2013 Dec 5;14:856. doi: 10.1186/1471-2164-14-856.

12.

Improving mapping and SNP-calling performance in multiplexed targeted next-generation sequencing.

Elsharawy A, Forster M, Schracke N, Keller A, Thomsen I, Petersen BS, Stade B, Stähler P, Schreiber S, Rosenstiel P, Franke A.

BMC Genomics. 2012 Aug 22;13:417. doi: 10.1186/1471-2164-13-417.

13.

Anchored hybrid enrichment for massively high-throughput phylogenomics.

Lemmon AR, Emme SA, Lemmon EM.

Syst Biol. 2012 Oct;61(5):727-44. doi: 10.1093/sysbio/sys049. Epub 2012 May 17.

PMID:
22605266
14.

Biases in read coverage demonstrated by interlaboratory and interplatform comparison of 117 mRNA and genome sequencing experiments.

Khrameeva EE, Gelfand MS.

BMC Bioinformatics. 2012 Apr 19;13 Suppl 6:S4. doi: 10.1186/1471-2105-13-S6-S4.

15.
16.

Whole genome DNA methylation analysis based on high throughput sequencing technology.

Li N, Ye M, Li Y, Yan Z, Butcher LM, Sun J, Han X, Chen Q, Zhang X, Wang J.

Methods. 2010 Nov;52(3):203-12. doi: 10.1016/j.ymeth.2010.04.009. Epub 2010 Apr 27.

PMID:
20430099
17.

Targeted multiplex next-generation sequencing: advances in techniques of mitochondrial and nuclear DNA sequencing for population genomics.

Hancock-Hanser BL, Frey A, Leslie MS, Dutton PH, Archer FI, Morin PA.

Mol Ecol Resour. 2013 Mar;13(2):254-68. doi: 10.1111/1755-0998.12059. Epub 2013 Jan 25.

PMID:
23351075
18.

Double indexing overcomes inaccuracies in multiplex sequencing on the Illumina platform.

Kircher M, Sawyer S, Meyer M.

Nucleic Acids Res. 2012 Jan;40(1):e3. doi: 10.1093/nar/gkr771. Epub 2011 Oct 21.

19.

Targeted high throughput sequencing of a cancer-related exome subset by specific sequence capture with a fully automated microarray platform.

Summerer D, Schracke N, Wu H, Cheng Y, Bau S, Stähler CF, Stähler PF, Beier M.

Genomics. 2010 Apr;95(4):241-6. doi: 10.1016/j.ygeno.2010.01.006. Epub 2010 Feb 6.

20.

Preparation of next-generation sequencing libraries from damaged DNA.

Briggs AW, Heyn P.

Methods Mol Biol. 2012;840:143-54. doi: 10.1007/978-1-61779-516-9_18.

PMID:
22237532

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