Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 101

1.

Comparison of DNA extraction methodologies used for assessing fungal diversity via ITS sequencing.

Rittenour WR, Park JH, Cox-Ganser JM, Beezhold DH, Green BJ.

J Environ Monit. 2012 Mar;14(3):766-74. doi: 10.1039/c2em10779a. Epub 2012 Jan 9.

2.

Analysis of fungal flora in indoor dust by ribosomal DNA sequence analysis, quantitative PCR, and culture.

Pitkäranta M, Meklin T, Hyvärinen A, Paulin L, Auvinen P, Nevalainen A, Rintala H.

Appl Environ Microbiol. 2008 Jan;74(1):233-44. Epub 2007 Nov 2.

3.

Molecular profiling of fungal communities in moisture damaged buildings before and after remediation--a comparison of culture-dependent and culture-independent methods.

Pitkäranta M, Meklin T, Hyvärinen A, Nevalainen A, Paulin L, Auvinen P, Lignell U, Rintala H.

BMC Microbiol. 2011 Oct 21;11:235. doi: 10.1186/1471-2180-11-235.

4.

Internal transcribed spacer rRNA gene sequencing analysis of fungal diversity in Kansas City indoor environments.

Rittenour WR, Ciaccio CE, Barnes CS, Kashon ML, Lemons AR, Beezhold DH, Green BJ.

Environ Sci Process Impacts. 2014 Jan;16(1):33-43. doi: 10.1039/c3em00441d.

5.
6.

Microbial diversity in bioaerosol samples causing ODTS compared to reference bioaerosol samples as measured using Illumina sequencing and MALDI-TOF.

Madsen AM, Zervas A, Tendal K, Nielsen JL.

Environ Res. 2015 Jul;140:255-67. doi: 10.1016/j.envres.2015.03.027. Epub 2015 Apr 13.

7.

Estimating biodiversity of fungi in activated sludge communities using culture-independent methods.

Evans TN, Seviour RJ.

Microb Ecol. 2012 May;63(4):773-86. doi: 10.1007/s00248-011-9984-7. Epub 2011 Dec 2.

PMID:
22134599
8.

Diversity and phylogenetic affinities of foliar fungal endophytes in loblolly pine inferred by culturing and environmental PCR.

Arnold AE, Henk DA, Eells RL, Lutzoni F, Vilgalys R.

Mycologia. 2007 Mar-Apr;99(2):185-206.

PMID:
17682771
9.

The ITS region as a target for characterization of fungal communities using emerging sequencing technologies.

Nilsson RH, Ryberg M, Abarenkov K, Sjökvist E, Kristiansson E.

FEMS Microbiol Lett. 2009 Jul;296(1):97-101. doi: 10.1111/j.1574-6968.2009.01618.x. Epub 2009 May 1.

10.
11.

A universal DNA extraction and PCR amplification method for fungal rDNA sequence-based identification.

Romanelli AM, Fu J, Herrera ML, Wickes BL.

Mycoses. 2014 Oct;57(10):612-22. doi: 10.1111/myc.12208. Epub 2014 May 27.

PMID:
24865530
12.

Fungal community analysis by large-scale sequencing of environmental samples.

O'Brien HE, Parrent JL, Jackson JA, Moncalvo JM, Vilgalys R.

Appl Environ Microbiol. 2005 Sep;71(9):5544-50.

13.

Patterns of diversity for fungal assemblages of biological soil crusts from the southwestern United States.

Bates ST, Nash TH 3rd, Garcia-Pichel F.

Mycologia. 2012 Mar-Apr;104(2):353-61. doi: 10.3852/11-232. Epub 2011 Nov 28.

PMID:
22123652
14.

Oribatid mites as potential vectors for soil microfungi: study of mite-associated fungal species.

Renker C, Otto P, Schneider K, Zimdars B, Maraun M, Buscot F.

Microb Ecol. 2005 Nov;50(4):518-28. Epub 2005 Dec 13.

PMID:
16333718
15.

454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity.

Buée M, Reich M, Murat C, Morin E, Nilsson RH, Uroz S, Martin F.

New Phytol. 2009 Oct;184(2):449-56. doi: 10.1111/j.1469-8137.2009.03003.x. Epub 2009 Aug 22.

16.

Ancient fungi in Antarctic permafrost environments.

Kochkina G, Ivanushkina N, Ozerskaya S, Chigineva N, Vasilenko O, Firsov S, Spirina E, Gilichinsky D.

FEMS Microbiol Ecol. 2012 Nov;82(2):501-9. doi: 10.1111/j.1574-6941.2012.01442.x. Epub 2012 Jul 23.

17.

A culture-independent study of free-living fungi in biological soil crusts of the Colorado Plateau: their diversity and relative contribution to microbial biomass.

Bates ST, Garcia-Pichel F.

Environ Microbiol. 2009 Jan;11(1):56-67. doi: 10.1111/j.1462-2920.2008.01738.x. Epub 2008 Sep 1.

PMID:
18764875
18.

Analysis of the fungal flora in environmental dust samples by PCR-SSCP method.

Janke T, Schwaiger K, Ege M, Fahn C, von Mutius E, Bauer J, Mayer M.

Curr Microbiol. 2013 Aug;67(2):156-69. doi: 10.1007/s00284-013-0344-3. Epub 2013 Mar 10.

PMID:
23475138
19.

Improving molecular detection of fungal DNA in formalin-fixed paraffin-embedded tissues: comparison of five tissue DNA extraction methods using panfungal PCR.

Muñoz-Cadavid C, Rudd S, Zaki SR, Patel M, Moser SA, Brandt ME, Gómez BL.

J Clin Microbiol. 2010 Jun;48(6):2147-53. doi: 10.1128/JCM.00459-10. Epub 2010 Apr 14.

20.

Quality test of the MicroSeq D2 LSU Fungal Sequencing Kit for the identification of fungi.

Rozynek P, Gilges S, Brüning T, Wilhelm M.

Int J Hyg Environ Health. 2004 Jul;207(3):297-9.

PMID:
15330397

Supplemental Content

Support Center