Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 187

1.

Optimizing Illumina next-generation sequencing library preparation for extremely AT-biased genomes.

Oyola SO, Otto TD, Gu Y, Maslen G, Manske M, Campino S, Turner DJ, Macinnis B, Kwiatkowski DP, Swerdlow HP, Quail MA.

BMC Genomics. 2012 Jan 3;13:1. doi: 10.1186/1471-2164-13-1.

2.

Linear amplification for deep sequencing.

Hoeijmakers WA, Bártfai R, Françoijs KJ, Stunnenberg HG.

Nat Protoc. 2011 Jun 23;6(7):1026-36. doi: 10.1038/nprot.2011.345.

PMID:
21720315
3.

Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes.

Kozarewa I, Ning Z, Quail MA, Sanders MJ, Berriman M, Turner DJ.

Nat Methods. 2009 Apr;6(4):291-5. doi: 10.1038/nmeth.1311. Epub 2009 Mar 15.

4.
5.

Effect of PCR extension temperature on high-throughput sequencing.

López-Barragán MJ, Quiñones M, Cui K, Lemieux J, Zhao K, Su XZ.

Mol Biochem Parasitol. 2011 Mar;176(1):64-7. doi: 10.1016/j.molbiopara.2010.11.013. Epub 2010 Nov 26.

6.

Optimized whole-genome amplification strategy for extremely AT-biased template.

Oyola SO, Manske M, Campino S, Claessens A, Hamilton WL, Kekre M, Drury E, Mead D, Gu Y, Miles A, MacInnis B, Newbold C, Berriman M, Kwiatkowski DP.

DNA Res. 2014 Dec;21(6):661-71. doi: 10.1093/dnares/dsu028. Epub 2014 Sep 19.

7.

A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers.

Quail MA, Smith M, Coupland P, Otto TD, Harris SR, Connor TR, Bertoni A, Swerdlow HP, Gu Y.

BMC Genomics. 2012 Jul 24;13:341. doi: 10.1186/1471-2164-13-341.

9.

Comparison of Sample Preparation Methods Used for the Next-Generation Sequencing of Mycobacterium tuberculosis.

Tyler AD, Christianson S, Knox NC, Mabon P, Wolfe J, Van Domselaar G, Graham MR, Sharma MK.

PLoS One. 2016 Feb 5;11(2):e0148676. doi: 10.1371/journal.pone.0148676. eCollection 2016.

10.

Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries.

Aird D, Ross MG, Chen WS, Danielsson M, Fennell T, Russ C, Jaffe DB, Nusbaum C, Gnirke A.

Genome Biol. 2011;12(2):R18. doi: 10.1186/gb-2011-12-2-r18. Epub 2011 Feb 21.

11.

Illumina Library Preparation for Sequencing the GC-Rich Fraction of Heterogeneous Genomic DNA.

Tilak MK, Botero-Castro F, Galtier N, Nabholz B.

Genome Biol Evol. 2018 Feb 1;10(2):616-622. doi: 10.1093/gbe/evy022.

12.

Evaluation of a transposase protocol for rapid generation of shotgun high-throughput sequencing libraries from nanogram quantities of DNA.

Marine R, Polson SW, Ravel J, Hatfull G, Russell D, Sullivan M, Syed F, Dumas M, Wommack KE.

Appl Environ Microbiol. 2011 Nov;77(22):8071-9. doi: 10.1128/AEM.05610-11. Epub 2011 Sep 23.

13.

Library preparation methods for next-generation sequencing: tone down the bias.

van Dijk EL, Jaszczyszyn Y, Thermes C.

Exp Cell Res. 2014 Mar 10;322(1):12-20. doi: 10.1016/j.yexcr.2014.01.008. Epub 2014 Jan 15. Review.

PMID:
24440557
14.

Ultrasensitive single-genome sequencing: accurate, targeted, next generation sequencing of HIV-1 RNA.

Boltz VF, Rausch J, Shao W, Hattori J, Luke B, Maldarelli F, Mellors JW, Kearney MF, Coffin JM.

Retrovirology. 2016 Dec 20;13(1):87. doi: 10.1186/s12977-016-0321-6.

15.

Massively parallel sequencing of the entire control region and targeted coding region SNPs of degraded mtDNA using a simplified library preparation method.

Lee EY, Lee HY, Oh SY, Jung SE, Yang IS, Lee YH, Yang WI, Shin KJ.

Forensic Sci Int Genet. 2016 May;22:37-43. doi: 10.1016/j.fsigen.2016.01.014. Epub 2016 Jan 22.

PMID:
26844917
16.

Peregrine: A rapid and unbiased method to produce strand-specific RNA-Seq libraries from small quantities of starting material.

Langevin SA, Bent ZW, Solberg OD, Curtis DJ, Lane PD, Williams KP, Schoeniger JS, Sinha A, Lane TW, Branda SS.

RNA Biol. 2013 Apr;10(4):502-15. doi: 10.4161/rna.24284. Epub 2013 Apr 1.

17.

Development of a robust DNA quality and quantity assessment qPCR assay for targeted next-generation sequencing library preparation.

Dang J, Mendez P, Lee S, Kim JW, Yoon JH, Kim TW, Sailey CJ, Jablons DM, Kim IJ.

Int J Oncol. 2016 Oct;49(4):1755-65. doi: 10.3892/ijo.2016.3654. Epub 2016 Aug 11.

18.

Amplification-free library preparation for paired-end Illumina sequencing.

Kozarewa I, Turner DJ.

Methods Mol Biol. 2011;733:257-66. doi: 10.1007/978-1-61779-089-8_18.

PMID:
21431776
19.

DNA polymerase preference determines PCR priming efficiency.

Pan W, Byrne-Steele M, Wang C, Lu S, Clemmons S, Zahorchak RJ, Han J.

BMC Biotechnol. 2014 Jan 30;14:10. doi: 10.1186/1472-6750-14-10.

20.

Evaluation of library preparation methods for Illumina next generation sequencing of small amounts of DNA from foodborne parasites.

Nascimento FS, Wei-Pridgeon Y, Arrowood MJ, Moss D, da Silva AJ, Talundzic E, Qvarnstrom Y.

J Microbiol Methods. 2016 Nov;130:23-26. doi: 10.1016/j.mimet.2016.08.020. Epub 2016 Aug 21.

PMID:
27553132

Supplemental Content

Support Center