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Items: 1 to 20 of 103

1.

Base methylations in the double-stranded RNA by a fused methyltransferase bearing unwinding activity.

Kimura S, Ikeuchi Y, Kitahara K, Sakaguchi Y, Suzuki T, Suzuki T.

Nucleic Acids Res. 2012 May;40(9):4071-85. doi: 10.1093/nar/gkr1287. Epub 2011 Dec 30.

2.

Structure of the bifunctional methyltransferase YcbY (RlmKL) that adds the m7G2069 and m2G2445 modifications in Escherichia coli 23S rRNA.

Wang KT, Desmolaize B, Nan J, Zhang XW, Li LF, Douthwaite S, Su XD.

Nucleic Acids Res. 2012 Jun;40(11):5138-48. doi: 10.1093/nar/gks160. Epub 2012 Feb 22.

3.

Identification of Escherichia coli m2G methyltransferases: I. the ycbY gene encodes a methyltransferase specific for G2445 of the 23 S rRNA.

Lesnyak DV, Sergiev PV, Bogdanov AA, Dontsova OA.

J Mol Biol. 2006 Nov 17;364(1):20-5. Epub 2006 Sep 8.

PMID:
17010378
4.

YccW is the m5C methyltransferase specific for 23S rRNA nucleotide 1962.

Purta E, O'Connor M, Bujnicki JM, Douthwaite S.

J Mol Biol. 2008 Nov 14;383(3):641-51. doi: 10.1016/j.jmb.2008.08.061. Epub 2008 Aug 29.

PMID:
18786544
5.

YbeA is the m3Psi methyltransferase RlmH that targets nucleotide 1915 in 23S rRNA.

Purta E, Kaminska KH, Kasprzak JM, Bujnicki JM, Douthwaite S.

RNA. 2008 Oct;14(10):2234-44. doi: 10.1261/rna.1198108. Epub 2008 Aug 28.

6.

Indigenous and acquired modifications in the aminoglycoside binding sites of Pseudomonas aeruginosa rRNAs.

Gutierrez B, Douthwaite S, Gonzalez-Zorn B.

RNA Biol. 2013 Aug;10(8):1324-32. doi: 10.4161/rna.25984. Epub 2013 Aug 5.

7.

The last rRNA methyltransferase of E. coli revealed: the yhiR gene encodes adenine-N6 methyltransferase specific for modification of A2030 of 23S ribosomal RNA.

Golovina AY, Dzama MM, Osterman IA, Sergiev PV, Serebryakova MV, Bogdanov AA, Dontsova OA.

RNA. 2012 Sep;18(9):1725-34. doi: 10.1261/rna.034207.112. Epub 2012 Jul 30.

8.

Crystal structure of RlmM, the 2'O-ribose methyltransferase for C2498 of Escherichia coli 23S rRNA.

Punekar AS, Shepherd TR, Liljeruhm J, Forster AC, Selmer M.

Nucleic Acids Res. 2012 Nov 1;40(20):10507-20. doi: 10.1093/nar/gks727. Epub 2012 Aug 25.

9.

Identification of Escherichia coli m2G methyltransferases: II. The ygjO gene encodes a methyltransferase specific for G1835 of the 23 S rRNA.

Sergiev PV, Lesnyak DV, Bogdanov AA, Dontsova OA.

J Mol Biol. 2006 Nov 17;364(1):26-31. Epub 2006 Sep 8.

PMID:
17010380
10.

RluD, a highly conserved pseudouridine synthase, modifies 50S subunits more specifically and efficiently than free 23S rRNA.

Vaidyanathan PP, Deutscher MP, Malhotra A.

RNA. 2007 Nov;13(11):1868-76. Epub 2007 Sep 13.

11.

Purification, crystallization and preliminary X-ray crystallographic analysis of 23S RNA m(2)G2445 methyltransferase RlmL from Escherichia coli.

Wang KT, Ma L, Nan J, Su XD, Li L.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Nov 1;66(Pt 11):1484-6. doi: 10.1107/S1744309110035074. Epub 2010 Oct 28.

12.

Identification of pseudouridine methyltransferase in Escherichia coli.

Ero R, Peil L, Liiv A, Remme J.

RNA. 2008 Oct;14(10):2223-33. doi: 10.1261/rna.1186608. Epub 2008 Aug 28.

13.

CsdA, a cold-shock RNA helicase from Escherichia coli, is involved in the biogenesis of 50S ribosomal subunit.

Charollais J, Dreyfus M, Iost I.

Nucleic Acids Res. 2004 May 17;32(9):2751-9. Print 2004.

14.

Structural and functional insights into the molecular mechanism of rRNA m6A methyltransferase RlmJ.

Punekar AS, Liljeruhm J, Shepherd TR, Forster AC, Selmer M.

Nucleic Acids Res. 2013 Nov;41(20):9537-48. doi: 10.1093/nar/gkt719. Epub 2013 Aug 13.

15.

YgdE is the 2'-O-ribose methyltransferase RlmM specific for nucleotide C2498 in bacterial 23S rRNA.

Purta E, O'Connor M, Bujnicki JM, Douthwaite S.

Mol Microbiol. 2009 Jun;72(5):1147-58. doi: 10.1111/j.1365-2958.2009.06709.x. Epub 2009 Apr 28.

16.

Methyltransferase that modifies guanine 966 of the 16 S rRNA: functional identification and tertiary structure.

Lesnyak DV, Osipiuk J, Skarina T, Sergiev PV, Bogdanov AA, Edwards A, Savchenko A, Joachimiak A, Dontsova OA.

J Biol Chem. 2007 Feb 23;282(8):5880-7. Epub 2006 Dec 21.

17.

YebU is a m5C methyltransferase specific for 16 S rRNA nucleotide 1407.

Andersen NM, Douthwaite S.

J Mol Biol. 2006 Jun 9;359(3):777-86. Epub 2006 Apr 21.

PMID:
16678201
18.

Mutagenesis of the modified bases, m(5)U1939 and psi2504, in Escherichia coli 23S rRNA.

Persaud C, Lu Y, Vila-Sanjurjo A, Campbell JL, Finley J, O'Connor M.

Biochem Biophys Res Commun. 2010 Feb 5;392(2):223-7. doi: 10.1016/j.bbrc.2010.01.021. Epub 2010 Jan 11.

PMID:
20067766
19.

Crystal structure of the Escherichia coli 23S rRNA:m5C methyltransferase RlmI (YccW) reveals evolutionary links between RNA modification enzymes.

Sunita S, Tkaczuk KL, Purta E, Kasprzak JM, Douthwaite S, Bujnicki JM, Sivaraman J.

J Mol Biol. 2008 Nov 14;383(3):652-66. doi: 10.1016/j.jmb.2008.08.062. Epub 2008 Aug 29.

PMID:
18789337
20.

Ribosome assembly in Escherichia coli strains lacking the RNA helicase DeaD/CsdA or DbpA.

Peil L, Virumäe K, Remme J.

FEBS J. 2008 Aug;275(15):3772-82. doi: 10.1111/j.1742-4658.2008.06523.x. Epub 2008 Jun 28.

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