Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 118

1.

Exploring long non-coding RNAs through sequencing.

Atkinson SR, Marguerat S, Bähler J.

Semin Cell Dev Biol. 2012 Apr;23(2):200-5. doi: 10.1016/j.semcdb.2011.12.003. Epub 2011 Dec 20. Review.

2.

Integrative transcriptome analysis suggest processing of a subset of long non-coding RNAs to small RNAs.

Jalali S, Jayaraj GG, Scaria V.

Biol Direct. 2012 Aug 7;7:25. doi: 10.1186/1745-6150-7-25.

3.

A global transcriptional analysis of Plasmodium falciparum malaria reveals a novel family of telomere-associated lncRNAs.

Broadbent KM, Park D, Wolf AR, Van Tyne D, Sims JS, Ribacke U, Volkman S, Duraisingh M, Wirth D, Sabeti PC, Rinn JL.

Genome Biol. 2011 Jun 20;12(6):R56. doi: 10.1186/gb-2011-12-6-r56.

4.

Non-coding RNAs as regulators of gene expression and epigenetics.

Kaikkonen MU, Lam MT, Glass CK.

Cardiovasc Res. 2011 Jun 1;90(3):430-40. doi: 10.1093/cvr/cvr097. Epub 2011 May 9. Review.

5.

Enhancers as non-coding RNA transcription units: recent insights and future perspectives.

Li W, Notani D, Rosenfeld MG.

Nat Rev Genet. 2016 Apr;17(4):207-23. doi: 10.1038/nrg.2016.4. Epub 2016 Mar 7. Review.

PMID:
26948815
6.

Identification of long non-protein coding RNAs in chicken skeletal muscle using next generation sequencing.

Li T, Wang S, Wu R, Zhou X, Zhu D, Zhang Y.

Genomics. 2012 May;99(5):292-8. doi: 10.1016/j.ygeno.2012.02.003. Epub 2012 Feb 20.

7.

Enhancer RNAs and regulated transcriptional programs.

Lam MT, Li W, Rosenfeld MG, Glass CK.

Trends Biochem Sci. 2014 Apr;39(4):170-82. doi: 10.1016/j.tibs.2014.02.007. Epub 2014 Mar 24. Review.

8.

Long non-coding RNA modifies chromatin: epigenetic silencing by long non-coding RNAs.

Saxena A, Carninci P.

Bioessays. 2011 Nov;33(11):830-9. doi: 10.1002/bies.201100084. Epub 2011 Sep 14. Review.

9.

The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression.

Derrien T, Johnson R, Bussotti G, Tanzer A, Djebali S, Tilgner H, Guernec G, Martin D, Merkel A, Knowles DG, Lagarde J, Veeravalli L, Ruan X, Ruan Y, Lassmann T, Carninci P, Brown JB, Lipovich L, Gonzalez JM, Thomas M, Davis CA, Shiekhattar R, Gingeras TR, Hubbard TJ, Notredame C, Harrow J, Guigó R.

Genome Res. 2012 Sep;22(9):1775-89. doi: 10.1101/gr.132159.111.

10.

Rapid turnover of long noncoding RNAs and the evolution of gene expression.

Kutter C, Watt S, Stefflova K, Wilson MD, Goncalves A, Ponting CP, Odom DT, Marques AC.

PLoS Genet. 2012;8(7):e1002841. doi: 10.1371/journal.pgen.1002841. Epub 2012 Jul 26.

11.

LncRNA ontology: inferring lncRNA functions based on chromatin states and expression patterns.

Li Y, Chen H, Pan T, Jiang C, Zhao Z, Wang Z, Zhang J, Xu J, Li X.

Oncotarget. 2015 Nov 24;6(37):39793-805. doi: 10.18632/oncotarget.5794.

12.

Detection and Analysis of Long Noncoding RNAs.

Lai F, Blumenthal E, Shiekhattar R.

Methods Enzymol. 2016;573:421-44. doi: 10.1016/bs.mie.2016.03.010. Epub 2016 Mar 28.

PMID:
27372765
13.

Regulation of eukaryotic gene expression by the untranslated gene regions and other non-coding elements.

Barrett LW, Fletcher S, Wilton SD.

Cell Mol Life Sci. 2012 Nov;69(21):3613-34. doi: 10.1007/s00018-012-0990-9. Epub 2012 Apr 27. Review.

14.

Human cancer long non-coding RNA transcriptomes.

Gibb EA, Vucic EA, Enfield KS, Stewart GL, Lonergan KM, Kennett JY, Becker-Santos DD, MacAulay CE, Lam S, Brown CJ, Lam WL.

PLoS One. 2011;6(10):e25915. doi: 10.1371/journal.pone.0025915. Epub 2011 Oct 3.

15.

RNA sequencing of transcriptomes in human brain regions: protein-coding and non-coding RNAs, isoforms and alleles.

Webb A, Papp AC, Curtis A, Newman LC, Pietrzak M, Seweryn M, Handelman SK, Rempala GA, Wang D, Graziosa E, Tyndale RF, Lerman C, Kelsoe JR, Mash DC, Sadee W.

BMC Genomics. 2015 Nov 23;16:990. doi: 10.1186/s12864-015-2207-8.

16.

The eukaryotic genome as an RNA machine.

Amaral PP, Dinger ME, Mercer TR, Mattick JS.

Science. 2008 Mar 28;319(5871):1787-9. doi: 10.1126/science.1155472.

PMID:
18369136
17.

Post-transcriptional processing generates a diversity of 5'-modified long and short RNAs.

Affymetrix ENCODE Transcriptome Project; Cold Spring Harbor Laboratory ENCODE Transcriptome Project.

Nature. 2009 Feb 19;457(7232):1028-32. doi: 10.1038/nature07759. Epub 2009 Jan 25.

18.

Noncoding transcription at enhancers: general principles and functional models.

Natoli G, Andrau JC.

Annu Rev Genet. 2012;46:1-19. doi: 10.1146/annurev-genet-110711-155459. Epub 2012 Aug 16. Review.

PMID:
22905871
19.

Contrasting expression patterns of coding and noncoding parts of the human genome upon oxidative stress.

Giannakakis A, Zhang J, Jenjaroenpun P, Nama S, Zainolabidin N, Aau MY, Yarmishyn AA, Vaz C, Ivshina AV, Grinchuk OV, Voorhoeve M, Vardy LA, Sampath P, Kuznetsov VA, Kurochkin IV, Guccione E.

Sci Rep. 2015 May 29;5:9737. doi: 10.1038/srep09737.

20.

Genome-wide expression of non-coding RNA and global chromatin modification.

Zhang R, Zhang L, Yu W.

Acta Biochim Biophys Sin (Shanghai). 2012 Jan;44(1):40-7. doi: 10.1093/abbs/gmr112. Review.

PMID:
22194012

Supplemental Content

Support Center