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Items: 1 to 20 of 172


Evidence of a robust resident bacteriophage population revealed through analysis of the human salivary virome.

Pride DT, Salzman J, Haynes M, Rohwer F, Davis-Long C, White RA 3rd, Loomer P, Armitage GC, Relman DA.

ISME J. 2012 May;6(5):915-26. doi: 10.1038/ismej.2011.169.


Altered oral viral ecology in association with periodontal disease.

Ly M, Abeles SR, Boehm TK, Robles-Sikisaka R, Naidu M, Santiago-Rodriguez T, Pride DT.

MBio. 2014 May 20;5(3):e01133-14. doi: 10.1128/mBio.01133-14.


Association between living environment and human oral viral ecology.

Robles-Sikisaka R, Ly M, Boehm T, Naidu M, Salzman J, Pride DT.

ISME J. 2013 Sep;7(9):1710-24. doi: 10.1038/ismej.2013.63.


Effects of Long Term Antibiotic Therapy on Human Oral and Fecal Viromes.

Abeles SR, Ly M, Santiago-Rodriguez TM, Pride DT.

PLoS One. 2015 Aug 26;10(8):e0134941. doi: 10.1371/journal.pone.0134941.


Comparisons of clustered regularly interspaced short palindromic repeats and viromes in human saliva reveal bacterial adaptations to salivary viruses.

Pride DT, Salzman J, Relman DA.

Environ Microbiol. 2012 Sep;14(9):2564-76. doi: 10.1111/j.1462-2920.2012.02775.x.


The human skin double-stranded DNA virome: topographical and temporal diversity, genetic enrichment, and dynamic associations with the host microbiome.

Hannigan GD, Meisel JS, Tyldsley AS, Zheng Q, Hodkinson BP, SanMiguel AJ, Minot S, Bushman FD, Grice EA.

MBio. 2015 Oct 20;6(5):e01578-15. doi: 10.1128/mBio.01578-15.


The human gut virome: inter-individual variation and dynamic response to diet.

Minot S, Sinha R, Chen J, Li H, Keilbaugh SA, Wu GD, Lewis JD, Bushman FD.

Genome Res. 2011 Oct;21(10):1616-25. doi: 10.1101/gr.122705.111.


Viruses in the faecal microbiota of monozygotic twins and their mothers.

Reyes A, Haynes M, Hanson N, Angly FE, Heath AC, Rohwer F, Gordon JI.

Nature. 2010 Jul 15;466(7304):334-8. doi: 10.1038/nature09199.


Human oral viruses are personal, persistent and gender-consistent.

Abeles SR, Robles-Sikisaka R, Ly M, Lum AG, Salzman J, Boehm TK, Pride DT.

ISME J. 2014 Sep;8(9):1753-67. doi: 10.1038/ismej.2014.31.


Using high throughput sequencing to explore the biodiversity in oral bacterial communities.

Diaz PI, Dupuy AK, Abusleme L, Reese B, Obergfell C, Choquette L, Dongari-Bagtzoglou A, Peterson DE, Terzi E, Strausbaugh LD.

Mol Oral Microbiol. 2012 Jun;27(3):182-201. doi: 10.1111/j.2041-1014.2012.00642.x.


Molecular bases and role of viruses in the human microbiome.

Abeles SR, Pride DT.

J Mol Biol. 2014 Nov 25;426(23):3892-906. doi: 10.1016/j.jmb.2014.07.002. Review.


Preliminary characterization of the oral microbiota of Chinese adults with and without gingivitis.

Huang S, Yang F, Zeng X, Chen J, Li R, Wen T, Li C, Wei W, Liu J, Chen L, Davis C, Xu J.

BMC Oral Health. 2011 Dec 12;11:33. doi: 10.1186/1472-6831-11-33.


Metagenomic analysis of the viral communities in fermented foods.

Park EJ, Kim KH, Abell GC, Kim MS, Roh SW, Bae JW.

Appl Environ Microbiol. 2011 Feb;77(4):1284-91. doi: 10.1128/AEM.01859-10.


Phage-bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome.

Berg Miller ME, Yeoman CJ, Chia N, Tringe SG, Angly FE, Edwards RA, Flint HJ, Lamed R, Bayer EA, White BA.

Environ Microbiol. 2012 Jan;14(1):207-27. doi: 10.1111/j.1462-2920.2011.02593.x.


Bacteriophage isolation from human saliva.

Bachrach G, Leizerovici-Zigmond M, Zlotkin A, Naor R, Steinberg D.

Lett Appl Microbiol. 2003;36(1):50-3.


Analysis of streptococcal CRISPRs from human saliva reveals substantial sequence diversity within and between subjects over time.

Pride DT, Sun CL, Salzman J, Rao N, Loomer P, Armitage GC, Banfield JF, Relman DA.

Genome Res. 2011 Jan;21(1):126-36. doi: 10.1101/gr.111732.110.


Prevalence of lysogeny among soil bacteria and presence of 16S rRNA and trzN genes in viral-community DNA.

Ghosh D, Roy K, Williamson KE, White DC, Wommack KE, Sublette KL, Radosevich M.

Appl Environ Microbiol. 2008 Jan;74(2):495-502.


Chemostat culture systems support diverse bacteriophage communities from human feces.

Santiago-Rodriguez TM, Ly M, Daigneault MC, Brown IH, McDonald JA, Bonilla N, Vercoe EA, Pride DT.

Microbiome. 2015 Nov 9;3:58. doi: 10.1186/s40168-015-0124-3.


Characterization of bacteriophage communities and CRISPR profiles from dental plaque.

Naidu M, Robles-Sikisaka R, Abeles SR, Boehm TK, Pride DT.

BMC Microbiol. 2014 Jun 30;14:175. doi: 10.1186/1471-2180-14-175.


Analysis of oral microbiota in children with dental caries by PCR-DGGE and barcoded pyrosequencing.

Ling Z, Kong J, Jia P, Wei C, Wang Y, Pan Z, Huang W, Li L, Chen H, Xiang C.

Microb Ecol. 2010 Oct;60(3):677-90. doi: 10.1007/s00248-010-9712-8.

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