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Items: 1 to 20 of 211

1.

Methodology for reconstructing early zebrafish development from in vivo multiphoton microscopy.

Luengo-Oroz MA, Rubio-Guivernau JL, Faure E, Savy T, Duloquin L, Olivier N, Pastor D, Ledesma-Carbayo M, Débarre D, Bourgine P, Beaurepaire E, Peyriéras N, Santos A.

IEEE Trans Image Process. 2012 Apr;21(4):2335-40. doi: 10.1109/TIP.2011.2177911. Epub 2011 Dec 1.

PMID:
22155959
2.

Velocimetric third-harmonic generation microscopy: micrometer-scale quantification of morphogenetic movements in unstained embryos.

Débarre D, Supatto W, Farge E, Moulia B, Schanne-Klein MC, Beaurepaire E.

Opt Lett. 2004 Dec 15;29(24):2881-3.

PMID:
15645811
3.

Segmentation of cells from 3-D confocal images of live zebrafish embryo.

Zanella C, Rizzi B, Melani C, Campana M, Bourgine P, Mikula K, Peyriéras N, Sarti A.

Conf Proc IEEE Eng Med Biol Soc. 2007;2007:6028-31.

PMID:
18003388
4.

Cells tracking in a live zebrafish embryo.

Melani C, Campana M, Lombardot B, Rizzi B, Veronesi F, Zanella C, Bourgine P, Mikula K, Peyriéras N, Sarti A.

Conf Proc IEEE Eng Med Biol Soc. 2007;2007:1631-4.

PMID:
18002285
5.

Cell tracking in fluorescence images of embryogenesis processes with morphological reconstruction by 4D-tubular structuring elements.

Pastor D, Luengo-Oroz MA, Lombardot B, Gonzalvez I, Duloquin L, Savy T, Bourgine P, Peyrieras N, Santos A.

Conf Proc IEEE Eng Med Biol Soc. 2009;2009:970-3. doi: 10.1109/IEMBS.2009.5333756.

PMID:
19964254
6.

Cell morphodynamics visualization from images of zebrafish embryogenesis.

Campana M, Sarti A.

Comput Med Imaging Graph. 2010 Jul;34(5):394-403. doi: 10.1016/j.compmedimag.2010.01.003. Epub 2010 Feb 19.

PMID:
20171844
7.

3D+t morphological processing: applications to embryogenesis image analysis.

Luengo-Oroz MA, Pastor-Escuredo D, Castro-Gonzalez C, Faure E, Savy T, Lombardot B, Rubio-Guivernau JL, Duloquin L, Ledesma-Carbayo MJ, Bourgine P, Peyrieras N, Santos A.

IEEE Trans Image Process. 2012 Aug;21(8):3518-30. doi: 10.1109/TIP.2012.2197007. Epub 2012 May 1.

PMID:
22562755
8.

3D early embryogenesis image filtering by nonlinear partial differential equations.

Krivá Z, Mikula K, Peyriéras N, Rizzi B, Sarti A, Stasová O.

Med Image Anal. 2010 Aug;14(4):510-26. doi: 10.1016/j.media.2010.03.003. Epub 2010 Apr 10.

PMID:
20457535
9.

Automatic centerline extraction of irregular tubular structures using probability volumes from multiphoton imaging.

Santamaría-Pang A, Colbert CM, Saggau P, Kakadiaris IA.

Med Image Comput Comput Assist Interv. 2007;10(Pt 2):486-94.

PMID:
18044604
10.

Evaluation of segmentation algorithms on cell populations using CDF curves.

Hagwood C, Bernal J, Halter M, Elliott J.

IEEE Trans Med Imaging. 2012 Feb;31(2):380-90. doi: 10.1109/TMI.2011.2169806. Epub 2011 Sep 29.

PMID:
21965194
11.

3-D zebrafish embryo image filtering by nonlinear partial differential equations.

Rizzi B, Campana M, Zanella C, Melani C, Cunderlik R, Krivá Z, Bourgine P, Mikula K, Peyriéras N, Sarti A.

Conf Proc IEEE Eng Med Biol Soc. 2007;2007:6252-5.

PMID:
18003450
12.

Cell lineage reconstruction of early zebrafish embryos using label-free nonlinear microscopy.

Olivier N, Luengo-Oroz MA, Duloquin L, Faure E, Savy T, Veilleux I, Solinas X, Débarre D, Bourgine P, Santos A, Peyriéras N, Beaurepaire E.

Science. 2010 Aug 20;329(5994):967-71. doi: 10.1126/science.1189428.

13.

Non-rigid registration of 3D multi-channel microscopy images of cell nuclei.

Yang S, Köhler D, Teller K, Cremer T, Le Baccon P, Heard E, Eils R, Rohr K.

Med Image Comput Comput Assist Interv. 2006;9(Pt 1):907-14.

PMID:
17354977
14.

Automatic 3D segmentation of multiphoton images: a key step for the quantification of human skin.

Decencière E, Tancrède-Bohin E, Dokládal P, Koudoro S, Pena AM, Baldeweck T.

Skin Res Technol. 2013 May;19(2):115-24. doi: 10.1111/srt.12019. Epub 2013 Feb 26.

PMID:
23441573
15.

Nonlinear optical microscopy: use of second harmonic generation and two-photon microscopy for automated quantitative liver fibrosis studies.

Sun W, Chang S, Tai DC, Tan N, Xiao G, Tang H, Yu H.

J Biomed Opt. 2008 Nov-Dec;13(6):064010. doi: 10.1117/1.3041159.

PMID:
19123657
16.

On the fundamental imaging-depth limit in two-photon microscopy.

Theer P, Denk W.

J Opt Soc Am A Opt Image Sci Vis. 2006 Dec;23(12):3139-49.

PMID:
17106469
17.

Differentiation of normal and cancerous lung tissues by multiphoton imaging.

Wang CC, Li FC, Wu RJ, Hovhannisyan VA, Lin WC, Lin SJ, So PT, Dong CY.

J Biomed Opt. 2009 Jul-Aug;14(4):044034. doi: 10.1117/1.3210768.

PMID:
19725745
18.

High-resolution reconstruction of the beating zebrafish heart.

Mickoleit M, Schmid B, Weber M, Fahrbach FO, Hombach S, Reischauer S, Huisken J.

Nat Methods. 2014 Sep;11(9):919-22. doi: 10.1038/nmeth.3037. Epub 2014 Jul 20.

PMID:
25042787
19.

Image heterogeneity correction in large-area, three-dimensional multiphoton microscopy.

Hovhannisyan VA, Su PJ, Chen YF, Dong CY.

Opt Express. 2008 Mar 31;16(7):5107-17.

PMID:
18542610
20.

Three-dimensional tracking of occluded objects using integral imaging.

Cho M, Javidi B.

Opt Lett. 2008 Dec 1;33(23):2737-9.

PMID:
19037410

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