Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 76

1.

Interleukin-27 induces interferon-inducible genes: analysis of gene expression profiles using Affymetrix microarray and DAVID.

Imamichi T, Yang J, Huang da W, Sherman B, Lempicki RA.

Methods Mol Biol. 2012;820:25-53. doi: 10.1007/978-1-61779-439-1_3.

PMID:
22131024
2.

IL-27, a novel anti-HIV cytokine, activates multiple interferon-inducible genes in macrophages.

Imamichi T, Yang J, Huang DW, Brann TW, Fullmer BA, Adelsberger JW, Lempicki RA, Baseler MW, Lane HC.

AIDS. 2008 Jan 2;22(1):39-45.

PMID:
18090390
3.
4.

DAVID Knowledgebase: a gene-centered database integrating heterogeneous gene annotation resources to facilitate high-throughput gene functional analysis.

Sherman BT, Huang da W, Tan Q, Guo Y, Bour S, Liu D, Stephens R, Baseler MW, Lane HC, Lempicki RA.

BMC Bioinformatics. 2007 Nov 2;8:426.

5.

Two recombinant human interferon-beta 1a pharmaceutical preparations produce a similar transcriptional response determined using whole genome microarray analysis.

Prync AE, Yankilevich P, Barrero PR, Bello R, Marangunich L, Vidal A, Criscuolo M, Benasayag L, Famulari AL, Domínguez RO, Kauffman MA, Diez RA.

Int J Clin Pharmacol Ther. 2008 Feb;46(2):64-71.

PMID:
18218286
6.

Performance comparison of two microarray platforms to assess differential gene expression in human monocyte and macrophage cells.

Maouche S, Poirier O, Godefroy T, Olaso R, Gut I, Collet JP, Montalescot G, Cambien F.

BMC Genomics. 2008 Jun 25;9:302. doi: 10.1186/1471-2164-9-302.

7.

Extracting biological meaning from large gene lists with DAVID.

Huang da W, Sherman BT, Zheng X, Yang J, Imamichi T, Stephens R, Lempicki RA.

Curr Protoc Bioinformatics. 2009 Sep;Chapter 13:Unit 13.11. doi: 10.1002/0471250953.bi1311s27.

PMID:
19728287
8.

DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists.

Huang DW, Sherman BT, Tan Q, Kir J, Liu D, Bryant D, Guo Y, Stephens R, Baseler MW, Lane HC, Lempicki RA.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W169-75.

9.

Gene ARMADA: an integrated multi-analysis platform for microarray data implemented in MATLAB.

Chatziioannou A, Moulos P, Kolisis FN.

BMC Bioinformatics. 2009 Oct 27;10:354. doi: 10.1186/1471-2105-10-354.

10.

Comparing gene annotation enrichment tools for functional modeling of agricultural microarray data.

van den Berg BH, Thanthiriwatte C, Manda P, Bridges SM.

BMC Bioinformatics. 2009 Oct 8;10 Suppl 11:S9. doi: 10.1186/1471-2105-10-S11-S9.

11.

Microarray study reveals that HIV-1 induces rapid type-I interferon-dependent p53 mRNA up-regulation in human primary CD4+ T cells.

Imbeault M, Ouellet M, Tremblay MJ.

Retrovirology. 2009 Jan 15;6:5. doi: 10.1186/1742-4690-6-5.

12.

Functional comparison of microarray data across multiple platforms using the method of percentage of overlapping functions.

Li Z, Kwekel JC, Chen T.

Methods Mol Biol. 2012;802:123-39. doi: 10.1007/978-1-61779-400-1_9.

PMID:
22130878
13.

DAVID: Database for Annotation, Visualization, and Integrated Discovery.

Dennis G Jr, Sherman BT, Hosack DA, Yang J, Gao W, Lane HC, Lempicki RA.

Genome Biol. 2003;4(5):P3.

14.

The role of IL-1beta in reduced IL-7 production by stromal and epithelial cells: a model for impaired T-cell numbers in the gut during HIV-1 infection.

Thang PH, Ruffin N, Brodin D, Rethi B, Cam PD, Hien NT, Lopalco L, Vivar N, Chiodi F.

J Intern Med. 2010 Aug;268(2):181-93. doi: 10.1111/j.1365-2796.2010.02241.x.

15.

A web-based platform for rice microarray annotation and data analysis.

Chen D, Zhang F, Yuan C, Lu J, Li X, Chen M.

Sci China Life Sci. 2010 Dec;53(12):1467-73. doi: 10.1007/s11427-010-4101-6.

PMID:
21181349
16.

Calculation of reliable transcript levels of annotated genes on the basis of multiple probe-sets in Affymetrix microarrays.

Jaksik R, Polańska J, Herok R, Rzeszowska-Wolny J.

Acta Biochim Pol. 2009;56(2):271-7.

17.

caGEDA: a web application for the integrated analysis of global gene expression patterns in cancer.

Patel S, Lyons-Weiler J.

Appl Bioinformatics. 2004;3(1):49-62.

PMID:
16323966
18.

Exon Array Analyzer: a web interface for Affymetrix exon array analysis.

Gellert P, Uchida S, Braun T.

Bioinformatics. 2009 Dec 15;25(24):3323-4. doi: 10.1093/bioinformatics/btp577.

PMID:
19808879
19.

Design and evaluation of Actichip, a thematic microarray for the study of the actin cytoskeleton.

Muller J, Mehlen A, Vetter G, Yatskou M, Muller A, Chalmel F, Poch O, Friederich E, Vallar L.

BMC Genomics. 2007 Aug 29;8:294.

20.

Comprehensive transcriptional profiling of human epidermis, reconstituted epidermal equivalents, and cultured keratinocytes using DNA microarray chips.

Lee DD, Zavadil J, Tomic-Canic M, Blumenberg M.

Methods Mol Biol. 2010;585:193-223. doi: 10.1007/978-1-60761-380-0_15.

PMID:
19908006

Supplemental Content

Support Center