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Items: 1 to 20 of 86

1.

Laboratory evolution of Geobacter sulfurreducens for enhanced growth on lactate via a single-base-pair substitution in a transcriptional regulator.

Summers ZM, Ueki T, Ismail W, Haveman SA, Lovley DR.

ISME J. 2012 May;6(5):975-83. doi: 10.1038/ismej.2011.166. Epub 2011 Nov 24.

2.

A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution.

Tremblay PL, Summers ZM, Glaven RH, Nevin KP, Zengler K, Barrett CL, Qiu Y, Palsson BO, Lovley DR.

Environ Microbiol. 2011 Jan;13(1):13-23. doi: 10.1111/j.1462-2920.2010.02302.x.

PMID:
20636372
3.

Genes for two multicopper proteins required for Fe(III) oxide reduction in Geobacter sulfurreducens have different expression patterns both in the subsurface and on energy-harvesting electrodes.

Holmes DE, Mester T, O'Neil RA, Perpetua LA, Larrahondo MJ, Glaven R, Sharma ML, Ward JE, Nevin KP, Lovley DR.

Microbiology. 2008 May;154(Pt 5):1422-35. doi: 10.1099/mic.0.2007/014365-0.

PMID:
18451051
4.

Geobacter sulfurreducens strain engineered for increased rates of respiration.

Izallalen M, Mahadevan R, Burgard A, Postier B, Didonato R Jr, Sun J, Schilling CH, Lovley DR.

Metab Eng. 2008 Sep;10(5):267-75. doi: 10.1016/j.ymben.2008.06.005. Epub 2008 Jun 27.

PMID:
18644460
5.

Functional environmental proteomics: elucidating the role of a c-type cytochrome abundant during uranium bioremediation.

Yun J, Malvankar NS, Ueki T, Lovley DR.

ISME J. 2016 Feb;10(2):310-20. doi: 10.1038/ismej.2015.113. Epub 2015 Jul 3.

6.

Development of a biomarker for Geobacter activity and strain composition; proteogenomic analysis of the citrate synthase protein during bioremediation of U(VI).

Wilkins MJ, Callister SJ, Miletto M, Williams KH, Nicora CD, Lovley DR, Long PE, Lipton MS.

Microb Biotechnol. 2011 Jan;4(1):55-63. doi: 10.1111/j.1751-7915.2010.00194.x.

7.

Quantifying expression of Geobacter spp. oxidative stress genes in pure culture and during in situ uranium bioremediation.

Mouser PJ, Holmes DE, Perpetua LA, DiDonato R, Postier B, Liu A, Lovley DR.

ISME J. 2009 Apr;3(4):454-65. doi: 10.1038/ismej.2008.126. Epub 2009 Jan 8.

PMID:
19129865
8.

Molecular analysis of phosphate limitation in Geobacteraceae during the bioremediation of a uranium-contaminated aquifer.

N'Guessan AL, Elifantz H, Nevin KP, Mouser PJ, Methé B, Woodard TL, Manley K, Williams KH, Wilkins MJ, Larsen JT, Long PE, Lovley DR.

ISME J. 2010 Feb;4(2):253-66. doi: 10.1038/ismej.2009.115. Epub 2009 Dec 10.

PMID:
20010635
9.

Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information.

Yan B, Núñez C, Ueki T, Esteve-Núñez A, Puljic M, Adkins RM, Methé BA, Lovley DR, Krushkal J.

Gene. 2006 Dec 15;384:73-95. Epub 2006 Jul 20.

PMID:
17014972
11.

Genes involved in the anaerobic degradation of toluene in a denitrifying bacterium, strain EbN1.

Kube M, Heider J, Amann J, Hufnagel P, Kühner S, Beck A, Reinhardt R, Rabus R.

Arch Microbiol. 2004 Mar;181(3):182-94. Epub 2004 Jan 21.

PMID:
14735297
12.
13.

Highly conserved genes in Geobacter species with expression patterns indicative of acetate limitation.

Risso C, Methé BA, Elifantz H, Holmes DE, Lovley DR.

Microbiology. 2008 Sep;154(Pt 9):2589-99. doi: 10.1099/mic.0.2008/017244-0.

PMID:
18757793
14.

Coupling a genome-scale metabolic model with a reactive transport model to describe in situ uranium bioremediation.

Scheibe TD, Mahadevan R, Fang Y, Garg S, Long PE, Lovley DR.

Microb Biotechnol. 2009 Mar;2(2):274-86. doi: 10.1111/j.1751-7915.2009.00087.x.

15.
16.

Geobacter uraniireducens sp. nov., isolated from subsurface sediment undergoing uranium bioremediation.

Shelobolina ES, Vrionis HA, Findlay RH, Lovley DR.

Int J Syst Evol Microbiol. 2008 May;58(Pt 5):1075-8. doi: 10.1099/ijs.0.65377-0.

PMID:
18450691
17.

Transcriptome of Geobacter uraniireducens growing in uranium-contaminated subsurface sediments.

Holmes DE, O'Neil RA, Chavan MA, N'Guessan LA, Vrionis HA, Perpetua LA, Larrahondo MJ, DiDonato R, Liu A, Lovley DR.

ISME J. 2009 Feb;3(2):216-30. doi: 10.1038/ismej.2008.89. Epub 2008 Oct 9.

PMID:
18843300
18.

Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens.

Leang C, Krushkal J, Ueki T, Puljic M, Sun J, Juárez K, Núñez C, Reguera G, DiDonato R, Postier B, Adkins RM, Lovley DR.

BMC Genomics. 2009 Jul 22;10:331. doi: 10.1186/1471-2164-10-331.

19.

Subsurface clade of Geobacteraceae that predominates in a diversity of Fe(III)-reducing subsurface environments.

Holmes DE, O'Neil RA, Vrionis HA, N'guessan LA, Ortiz-Bernad I, Larrahondo MJ, Adams LA, Ward JA, Nicoll JS, Nevin KP, Chavan MA, Johnson JP, Long PE, Lovley DR.

ISME J. 2007 Dec;1(8):663-77. Epub 2007 Oct 18.

PMID:
18059491
20.

Genome-wide gene regulation of biosynthesis and energy generation by a novel transcriptional repressor in Geobacter species.

Ueki T, Lovley DR.

Nucleic Acids Res. 2010 Jan;38(3):810-21. doi: 10.1093/nar/gkp1085. Epub 2009 Nov 25.

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