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Items: 1 to 20 of 95

1.

Development of functional gene microarrays for microbial community analysis.

He Z, Deng Y, Zhou J.

Curr Opin Biotechnol. 2012 Feb;23(1):49-55. doi: 10.1016/j.copbio.2011.11.001. Epub 2011 Nov 16. Review.

PMID:
22100036
2.

Applications of functional gene microarrays for profiling microbial communities.

He Z, Van Nostrand JD, Zhou J.

Curr Opin Biotechnol. 2012 Jun;23(3):460-6. doi: 10.1016/j.copbio.2011.12.021. Epub 2012 Jan 4. Review.

PMID:
22226464
3.

GeoChip 3.0 as a high-throughput tool for analyzing microbial community composition, structure and functional activity.

He Z, Deng Y, Van Nostrand JD, Tu Q, Xu M, Hemme CL, Li X, Wu L, Gentry TJ, Yin Y, Liebich J, Hazen TC, Zhou J.

ISME J. 2010 Sep;4(9):1167-79. doi: 10.1038/ismej.2010.46. Epub 2010 Apr 29.

PMID:
20428223
4.

Homogeneous versus heterogeneous probes for microbial ecological microarrays.

Bae JW, Park YH.

Trends Biotechnol. 2006 Jul;24(7):318-23. Epub 2006 May 12. Review.

PMID:
16697477
5.

Oligonucleotide microarrays for the study of coastal microbial communities.

Taroncher-Oldenburg G, Ward BB.

Methods Mol Biol. 2007;353:301-15.

PMID:
17332647
6.

Development and evaluation of 50-mer oligonucleotide arrays for detecting microbial populations in Acid Mine Drainages and bioleaching systems.

Yin H, Cao L, Qiu G, Wang D, Kellogg L, Zhou J, Dai Z, Liu X.

J Microbiol Methods. 2007 Jul;70(1):165-78. Epub 2007 Apr 29.

PMID:
17543401
7.
8.

Microarray-based functional gene analysis of soil microbial communities during ozonation and biodegradation of crude oil.

Liang Y, Nostrand JD, Wang J, Zhang X, Zhou J, Li G.

Chemosphere. 2009 Apr;75(2):193-9. doi: 10.1016/j.chemosphere.2008.12.007. Epub 2009 Jan 13.

PMID:
19144375
9.

Analysis of environmental microbial communities by reverse sample genome probing.

Greene EA, Voordouw G.

J Microbiol Methods. 2003 May;53(2):211-9. Review.

PMID:
12654492
10.

Functional gene array-based analysis of microbial community structure in groundwaters with a gradient of contaminant levels.

Waldron PJ, Wu L, Van Nostrand JD, Schadt CW, He Z, Watson DB, Jardine PM, Palumbo AV, Hazen TC, Zhou J.

Environ Sci Technol. 2009 May 15;43(10):3529-34.

PMID:
19544850
11.

Highly parallel microbial diagnostics using oligonucleotide microarrays.

Loy A, Bodrossy L.

Clin Chim Acta. 2006 Jan;363(1-2):106-19. Epub 2005 Aug 26. Review.

PMID:
16126187
12.

GeoChip: a comprehensive microarray for investigating biogeochemical, ecological and environmental processes.

He Z, Gentry TJ, Schadt CW, Wu L, Liebich J, Chong SC, Huang Z, Wu W, Gu B, Jardine P, Criddle C, Zhou J.

ISME J. 2007 May;1(1):67-77.

PMID:
18043615
13.

Geochip-based analysis of microbial communities in alpine meadow soils in the Qinghai-Tibetan plateau.

Zhang Y, Lu Z, Liu S, Yang Y, He Z, Ren Z, Zhou J, Li D.

BMC Microbiol. 2013 Mar 29;13:72. doi: 10.1186/1471-2180-13-72.

14.

Evaluation of 50-mer oligonucleotide arrays for detecting microbial populations in environmental samples.

Tiquia SM, Wu L, Chong SC, Passovets S, Xu D, Xu Y, Zhou J.

Biotechniques. 2004 Apr;36(4):664-70, 672, 674-5.

PMID:
15088384
15.

HiSpOD: probe design for functional DNA microarrays.

Dugat-Bony E, Missaoui M, Peyretaillade E, Biderre-Petit C, Bouzid O, Gouinaud C, Hill D, Peyret P.

Bioinformatics. 2011 Mar 1;27(5):641-8. doi: 10.1093/bioinformatics/btq712. Epub 2011 Jan 6.

PMID:
21216777
16.

GeoChip 4: a functional gene-array-based high-throughput environmental technology for microbial community analysis.

Tu Q, Yu H, He Z, Deng Y, Wu L, Van Nostrand JD, Zhou A, Voordeckers J, Lee YJ, Qin Y, Hemme CL, Shi Z, Xue K, Yuan T, Wang A, Zhou J.

Mol Ecol Resour. 2014 Sep;14(5):914-28. doi: 10.1111/1755-0998.12239. Epub 2014 Mar 14.

PMID:
24520909
17.

Design and testing of 'genome-proxy' microarrays to profile marine microbial communities.

Rich VI, Konstantinidis K, DeLong EF.

Environ Microbiol. 2008 Feb;10(2):506-21. Epub 2007 Nov 19.

PMID:
18028413
18.

Strain/species-specific probe design for microbial identification microarrays.

Tu Q, He Z, Deng Y, Zhou J.

Appl Environ Microbiol. 2013 Aug;79(16):5085-8. doi: 10.1128/AEM.01124-13. Epub 2013 Jun 7.

19.

Taking arrays from the lab to the field: trying to make sense of the unknown.

Chandler DP, Jarrell AE.

Biotechniques. 2005 Apr;38(4):591-600.

20.

Microarray applications in microbial ecology research.

Gentry TJ, Wickham GS, Schadt CW, He Z, Zhou J.

Microb Ecol. 2006 Aug;52(2):159-75. Epub 2006 Aug 8. Review.

PMID:
16897303

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