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Items: 1 to 20 of 93

1.

Long noncoding RNAs in mammalian cells: what, where, and why?

Chen LL, Carmichael GG.

Wiley Interdiscip Rev RNA. 2010 Jul-Aug;1(1):2-21. doi: 10.1002/wrna.5. Epub 2010 May 6. Review.

PMID:
21956903
2.

Long noncoding RNA: unveiling hidden layer of gene regulatory networks.

Kim ED, Sung S.

Trends Plant Sci. 2012 Jan;17(1):16-21. doi: 10.1016/j.tplants.2011.10.008. Epub 2011 Nov 20. Review.

PMID:
22104407
3.

Long noncoding RNAs are generated from the mitochondrial genome and regulated by nuclear-encoded proteins.

Rackham O, Shearwood AM, Mercer TR, Davies SM, Mattick JS, Filipovska A.

RNA. 2011 Dec;17(12):2085-93. doi: 10.1261/rna.029405.111. Epub 2011 Oct 25.

4.

The research strategies for probing the function of long noncoding RNAs.

Yan B, Wang ZH, Guo JT.

Genomics. 2012 Feb;99(2):76-80. doi: 10.1016/j.ygeno.2011.12.002. Epub 2011 Dec 16. Review.

5.

Decoding the function of nuclear long non-coding RNAs.

Chen LL, Carmichael GG.

Curr Opin Cell Biol. 2010 Jun;22(3):357-64. doi: 10.1016/j.ceb.2010.03.003. Epub 2010 Mar 29. Review.

6.

Computational analysis of functional long noncoding RNAs reveals lack of peptide-coding capacity and parallels with 3' UTRs.

Niazi F, Valadkhan S.

RNA. 2012 Apr;18(4):825-43. doi: 10.1261/rna.029520.111. Epub 2012 Feb 23.

7.

Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis.

Pauli A, Valen E, Lin MF, Garber M, Vastenhouw NL, Levin JZ, Fan L, Sandelin A, Rinn JL, Regev A, Schier AF.

Genome Res. 2012 Mar;22(3):577-91. doi: 10.1101/gr.133009.111. Epub 2011 Nov 22.

8.

Life without RNAi: noncoding RNAs and their functions in Saccharomyces cerevisiae.

Harrison BR, Yazgan O, Krebs JE.

Biochem Cell Biol. 2009 Oct;87(5):767-79. doi: 10.1139/O09-043. Review.

PMID:
19898526
9.

A screen for nuclear transcripts identifies two linked noncoding RNAs associated with SC35 splicing domains.

Hutchinson JN, Ensminger AW, Clemson CM, Lynch CR, Lawrence JB, Chess A.

BMC Genomics. 2007 Feb 1;8:39.

10.

Viroids: self-replicating, mobile, and fast-evolving noncoding regulatory RNAs.

Ding B.

Wiley Interdiscip Rev RNA. 2010 Nov-Dec;1(3):362-75. doi: 10.1002/wrna.22. Review.

PMID:
21956936
11.

lncRNAdb: a reference database for long noncoding RNAs.

Amaral PP, Clark MB, Gascoigne DK, Dinger ME, Mattick JS.

Nucleic Acids Res. 2011 Jan;39(Database issue):D146-51. doi: 10.1093/nar/gkq1138. Epub 2010 Nov 25.

12.

Long noncoding RNAs, chromatin, and development.

Caley DP, Pink RC, Trujillano D, Carter DR.

ScientificWorldJournal. 2010 Jan 8;10:90-102. doi: 10.1100/tsw.2010.7. Review.

13.

An expanding universe of noncoding RNAs.

Storz G.

Science. 2002 May 17;296(5571):1260-3.

PMID:
12016301
14.

Emerging functional and mechanistic paradigms of mammalian long non-coding RNAs.

Moran VA, Perera RJ, Khalil AM.

Nucleic Acids Res. 2012 Aug;40(14):6391-400. doi: 10.1093/nar/gks296. Epub 2012 Apr 5. Review.

15.

[Transcriptome and non-coding RNAs: so many mRNA-like non-coding RNAs are really functional?].

Kanai A.

Tanpakushitsu Kakusan Koso. 2004 Dec;49(16):2521-8. Review. Japanese. No abstract available.

PMID:
15609715
16.

An extensive class of small RNAs in Caenorhabditis elegans.

Lee RC, Ambros V.

Science. 2001 Oct 26;294(5543):862-4.

17.

Genome-wide identification of long noncoding RNAs in CD8+ T cells.

Pang KC, Dinger ME, Mercer TR, Malquori L, Grimmond SM, Chen W, Mattick JS.

J Immunol. 2009 Jun 15;182(12):7738-48. doi: 10.4049/jimmunol.0900603.

18.

Characterization of the RNA content of chromatin.

Mondal T, Rasmussen M, Pandey GK, Isaksson A, Kanduri C.

Genome Res. 2010 Jul;20(7):899-907. doi: 10.1101/gr.103473.109. Epub 2010 Apr 19.

19.

RNAdb--a comprehensive mammalian noncoding RNA database.

Pang KC, Stephen S, Engström PG, Tajul-Arifin K, Chen W, Wahlestedt C, Lenhard B, Hayashizaki Y, Mattick JS.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D125-30.

20.

Discovery and annotation of long noncoding RNAs.

Mattick JS, Rinn JL.

Nat Struct Mol Biol. 2015 Jan;22(1):5-7. doi: 10.1038/nsmb.2942.

PMID:
25565026

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