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Items: 1 to 20 of 70

1.

High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis.

Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN.

Genome Res. 2012 Jan;22(1):163-76. doi: 10.1101/gr.123547.111. Epub 2011 Sep 22.

2.

Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets.

Wang XJ, Reyes JL, Chua NH, Gaasterland T.

Genome Biol. 2004;5(9):R65. Epub 2004 Aug 31.

3.

Identification and expression profiling of Vigna mungo microRNAs from leaf small RNA transcriptome by deep sequencing.

Paul S, Kundu A, Pal A.

J Integr Plant Biol. 2014 Jan;56(1):15-23. doi: 10.1111/jipb.12115. Epub 2013 Dec 19.

PMID:
24138283
4.

Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis.

Sunkar R, Zhu JK.

Plant Cell. 2004 Aug;16(8):2001-19. Epub 2004 Jul 16.

5.

Novel and conserved microRNAs in soybean floral whorls.

Kulcheski FR, Molina LG, da Fonseca GC, de Morais GL, de Oliveira LF, Margis R.

Gene. 2016 Jan 10;575(2 Pt 1):213-23. doi: 10.1016/j.gene.2015.08.061. Epub 2015 Sep 2.

6.

Identification and profiling of novel microRNAs in the Brassica rapa genome based on small RNA deep sequencing.

Kim B, Yu HJ, Park SG, Shin JY, Oh M, Kim N, Mun JH.

BMC Plant Biol. 2012 Nov 19;12:218. doi: 10.1186/1471-2229-12-218.

7.

Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.

Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ.

Plant Cell. 2011 Dec;23(12):4185-207. doi: 10.1105/tpc.111.089045. Epub 2011 Dec 9.

8.

Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules.

Wang Y, Li P, Cao X, Wang X, Zhang A, Li X.

Biochem Biophys Res Commun. 2009 Jan 23;378(4):799-803. doi: 10.1016/j.bbrc.2008.11.140. Epub 2008 Dec 11.

PMID:
19084500
9.

Characterization of the small RNA component of leaves and fruits from four different cucurbit species.

Jagadeeswaran G, Nimmakayala P, Zheng Y, Gowdu K, Reddy UK, Sunkar R.

BMC Genomics. 2012 Jul 23;13:329. doi: 10.1186/1471-2164-13-329.

10.

Cloning and characterization of microRNAs from wheat (Triticum aestivum L.).

Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q.

Genome Biol. 2007;8(6):R96.

11.

Bioinformatic identification and experimental validation of miRNAs from foxtail millet (Setaria italica).

Han J, Xie H, Sun Q, Wang J, Lu M, Wang W, Guo E, Pan J.

Gene. 2014 Aug 10;546(2):367-77. doi: 10.1016/j.gene.2014.05.050. Epub 2014 May 24.

PMID:
24862217
12.

Computational identification of novel microRNAs and targets in Brassica napus.

Xie FL, Huang SQ, Guo K, Xiang AL, Zhu YY, Nie L, Yang ZM.

FEBS Lett. 2007 Apr 3;581(7):1464-74. Epub 2007 Mar 8.

13.

Identification and characterization of microRNAs from tree peony (Paeonia ostii) and their response to copper stress.

Jin Q, Xue Z, Dong C, Wang Y, Chu L, Xu Y.

PLoS One. 2015 Feb 6;10(2):e0117584. doi: 10.1371/journal.pone.0117584. eCollection 2015.

14.

Uncovering small RNA-mediated responses to phosphate deficiency in Arabidopsis by deep sequencing.

Hsieh LC, Lin SI, Shih AC, Chen JW, Lin WY, Tseng CY, Li WH, Chiou TJ.

Plant Physiol. 2009 Dec;151(4):2120-32. doi: 10.1104/pp.109.147280. Epub 2009 Oct 23.

15.

Elucidation of the small RNA component of the transcriptome.

Lu C, Tej SS, Luo S, Haudenschild CD, Meyers BC, Green PJ.

Science. 2005 Sep 2;309(5740):1567-9.

16.

Discovery of barley miRNAs through deep sequencing of short reads.

Schreiber AW, Shi BJ, Huang CY, Langridge P, Baumann U.

BMC Genomics. 2011 Feb 25;12:129. doi: 10.1186/1471-2164-12-129.

17.

Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules.

Lelandais-Brière C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M.

Plant Cell. 2009 Sep;21(9):2780-96. doi: 10.1105/tpc.109.068130. Epub 2009 Sep 18.

18.

Identification of novel stress-regulated microRNAs from Oryza sativa L.

Jian X, Zhang L, Li G, Zhang L, Wang X, Cao X, Fang X, Chen F.

Genomics. 2010 Jan;95(1):47-55. doi: 10.1016/j.ygeno.2009.08.017. Epub 2009 Sep 29.

19.

Bioinformatic identification and expression analysis of new microRNAs from Medicago truncatula.

Zhou ZS, Huang SQ, Yang ZM.

Biochem Biophys Res Commun. 2008 Sep 26;374(3):538-42. doi: 10.1016/j.bbrc.2008.07.083. Epub 2008 Jul 26.

PMID:
18662674
20.

Enrichment of a set of microRNAs during the cotton fiber development.

Kwak PB, Wang QQ, Chen XS, Qiu CX, Yang ZM.

BMC Genomics. 2009 Sep 29;10:457. doi: 10.1186/1471-2164-10-457.

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