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Items: 1 to 20 of 118

1.

DNA methylation profiling in zebrafish.

Wu SF, Zhang H, Hammoud SS, Potok M, Nix DA, Jones DA, Cairns BR.

Methods Cell Biol. 2011;104:327-39. doi: 10.1016/B978-0-12-374814-0.00018-5.

PMID:
21924171
2.

Genome-wide DNA methylation profiling in zebrafish.

Murphy PJ, Cairns BR.

Methods Cell Biol. 2016;135:345-59. doi: 10.1016/bs.mcb.2016.05.002. Epub 2016 Jun 21.

PMID:
27443935
3.

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning.

Cokus SJ, Feng S, Zhang X, Chen Z, Merriman B, Haudenschild CD, Pradhan S, Nelson SF, Pellegrini M, Jacobsen SE.

Nature. 2008 Mar 13;452(7184):215-9. doi: 10.1038/nature06745. Epub 2008 Feb 17.

4.

Zebrafish as a model to study the role of DNA methylation in environmental toxicology.

Kamstra JH, Aleström P, Kooter JM, Legler J.

Environ Sci Pollut Res Int. 2015 Nov;22(21):16262-76. doi: 10.1007/s11356-014-3466-7. Epub 2014 Aug 31. Review.

PMID:
25172464
5.

DNA methylation: bisulphite modification and analysis.

Patterson K, Molloy L, Qu W, Clark S.

J Vis Exp. 2011 Oct 21;(56). pii: 3170. doi: 10.3791/3170.

6.

Genome-wide DNA methylome variation in two genetically distinct chicken lines using MethylC-seq.

Li J, Li R, Wang Y, Hu X, Zhao Y, Li L, Feng C, Gu X, Liang F, Lamont SJ, Hu S, Zhou H, Li N.

BMC Genomics. 2015 Oct 23;16:851. doi: 10.1186/s12864-015-2098-8.

7.

Chromatin modification in zebrafish development.

Cayuso Mas J, Noël ES, Ober EA.

Methods Cell Biol. 2011;104:401-28. doi: 10.1016/B978-0-12-374814-0.00022-7.

PMID:
21924175
8.

Chromatin states of developmentally-regulated genes revealed by DNA and histone methylation patterns in zebrafish embryos.

Lindeman LC, Winata CL, Aanes H, Mathavan S, Alestrom P, Collas P.

Int J Dev Biol. 2010;54(5):803-13. doi: 10.1387/ijdb.103081ll.

9.

Global and gene specific DNA methylation changes during zebrafish development.

Fang X, Corrales J, Thornton C, Scheffler BE, Willett KL.

Comp Biochem Physiol B Biochem Mol Biol. 2013 Sep;166(1):99-108. doi: 10.1016/j.cbpb.2013.07.007. Epub 2013 Jul 20.

10.

DNA methylation is crucial for the early development in the Oyster C. gigas.

Riviere G, Wu GC, Fellous A, Goux D, Sourdaine P, Favrel P.

Mar Biotechnol (NY). 2013 Dec;15(6):739-53. doi: 10.1007/s10126-013-9523-2. Epub 2013 Jul 24.

PMID:
23877618
11.

Genome-wide profiling of DNA methylation in human cancer cells.

Ogoshi K, Hashimoto S, Nakatani Y, Qu W, Oshima K, Tokunaga K, Sugano S, Hattori M, Morishita S, Matsushima K.

Genomics. 2011 Oct;98(4):280-7. doi: 10.1016/j.ygeno.2011.07.003. Epub 2011 Jul 29.

12.

Dynamic DNA cytosine methylation in the Populus trichocarpa genome: tissue-level variation and relationship to gene expression.

Vining KJ, Pomraning KR, Wilhelm LJ, Priest HD, Pellegrini M, Mockler TC, Freitag M, Strauss SH.

BMC Genomics. 2012 Jan 17;13:27. doi: 10.1186/1471-2164-13-27.

13.

Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis.

Zhang X, Yazaki J, Sundaresan A, Cokus S, Chan SW, Chen H, Henderson IR, Shinn P, Pellegrini M, Jacobsen SE, Ecker JR.

Cell. 2006 Sep 22;126(6):1189-201. Epub 2006 Aug 31.

14.

Methods in DNA methylation profiling.

Zuo T, Tycko B, Liu TM, Lin JJ, Huang TH.

Epigenomics. 2009 Dec;1(2):331-45. doi: 10.2217/epi.09.31. Review.

15.

Epigenetic regulation of multidrug resistance 1 gene expression: profiling CpG methylation status using bisulphite sequencing.

Baker EK, El-Osta A.

Methods Mol Biol. 2010;596:183-98. doi: 10.1007/978-1-60761-416-6_9.

PMID:
19949925
16.

Highly integrated single-base resolution maps of the epigenome in Arabidopsis.

Lister R, O'Malley RC, Tonti-Filippini J, Gregory BD, Berry CC, Millar AH, Ecker JR.

Cell. 2008 May 2;133(3):523-36. doi: 10.1016/j.cell.2008.03.029.

17.

Combining MeDIP-seq and MRE-seq to investigate genome-wide CpG methylation.

Li D, Zhang B, Xing X, Wang T.

Methods. 2015 Jan 15;72:29-40. doi: 10.1016/j.ymeth.2014.10.032. Epub 2014 Nov 6.

18.

DNA methylation-mediated epigenetic control.

Rottach A, Leonhardt H, Spada F.

J Cell Biochem. 2009 Sep 1;108(1):43-51. doi: 10.1002/jcb.22253.

PMID:
19565567
19.

Developmental enhancers revealed by extensive DNA methylome maps of zebrafish early embryos.

Lee HJ, Lowdon RF, Maricque B, Zhang B, Stevens M, Li D, Johnson SL, Wang T.

Nat Commun. 2015 Feb 20;6:6315. doi: 10.1038/ncomms7315.

20.

Genomics of CpG methylation in developing and developed zebrafish.

McGaughey DM, Abaan HO, Miller RM, Kropp PA, Brody LC.

G3 (Bethesda). 2014 Mar 21;4(5):861-9. doi: 10.1534/g3.113.009514.

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