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Items: 1 to 20 of 147

1.

In silico reconstruction of viral genomes from small RNAs improves virus-derived small interfering RNA profiling.

Vodovar N, Goic B, Blanc H, Saleh MC.

J Virol. 2011 Nov;85(21):11016-21. doi: 10.1128/JVI.05647-11. Epub 2011 Aug 31.

2.

The DNA virus Invertebrate iridescent virus 6 is a target of the Drosophila RNAi machinery.

Bronkhorst AW, van Cleef KW, Vodovar N, Ince IA, Blanc H, Vlak JM, Saleh MC, van Rij RP.

Proc Natl Acad Sci U S A. 2012 Dec 18;109(51):E3604-13. doi: 10.1073/pnas.1207213109. Epub 2012 Nov 14.

3.

RNA-based immunity terminates viral infection in adult Drosophila in the absence of viral suppression of RNA interference: characterization of viral small interfering RNA populations in wild-type and mutant flies.

Han YH, Luo YJ, Wu Q, Jovel J, Wang XH, Aliyari R, Han C, Li WX, Ding SW.

J Virol. 2011 Dec;85(24):13153-63. doi: 10.1128/JVI.05518-11. Epub 2011 Sep 28.

4.

Visitor, an informatic pipeline for analysis of viral siRNA sequencing datasets.

Antoniewski C.

Methods Mol Biol. 2011;721:123-42. doi: 10.1007/978-1-61779-037-9_7.

PMID:
21431682
5.

The role of virus-derived small interfering RNAs in RNA silencing in plants.

Zhu H, Guo H.

Sci China Life Sci. 2012 Feb;55(2):119-25. doi: 10.1007/s11427-012-4281-3. Epub 2012 Mar 15. Review.

PMID:
22415682
6.

Essential function in vivo for Dicer-2 in host defense against RNA viruses in drosophila.

Galiana-Arnoux D, Dostert C, Schneemann A, Hoffmann JA, Imler JL.

Nat Immunol. 2006 Jun;7(6):590-7. Epub 2006 Mar 23.

PMID:
16554838
7.

Functional specialization of the small interfering RNA pathway in response to virus infection.

Marques JT, Wang JP, Wang X, de Oliveira KP, Gao C, Aguiar ER, Jafari N, Carthew RW.

PLoS Pathog. 2013;9(8):e1003579. doi: 10.1371/journal.ppat.1003579. Epub 2013 Aug 29. Erratum in: PLoS Pathog. 2013 Oct;9(10): doi: 10.1371/annotation/4e52dfe0-479d-4be7-8545-b4ee8a1eb9ed.

8.

Virus-derived small interfering RNAs at the core of plant-virus interactions.

Llave C.

Trends Plant Sci. 2010 Dec;15(12):701-7. doi: 10.1016/j.tplants.2010.09.001. Review.

PMID:
20926332
9.

Defense and counterdefense in the RNAi-based antiviral immune system in insects.

van Mierlo JT, van Cleef KW, van Rij RP.

Methods Mol Biol. 2011;721:3-22. doi: 10.1007/978-1-61779-037-9_1. Review.

PMID:
21431676
10.

Caenorhabditis elegans RIG-I Homolog Mediates Antiviral RNA Interference Downstream of Dicer-Dependent Biogenesis of Viral Small Interfering RNAs.

Coffman SR, Lu J, Guo X, Zhong J, Jiang H, Broitman-Maduro G, Li WX, Lu R, Maduro M, Ding SW.

MBio. 2017 Mar 21;8(2). pii: e00264-17. doi: 10.1128/mBio.00264-17.

11.

Dicer-2 processes diverse viral RNA species.

Sabin LR, Zheng Q, Thekkat P, Yang J, Hannon GJ, Gregory BD, Tudor M, Cherry S.

PLoS One. 2013;8(2):e55458. doi: 10.1371/journal.pone.0055458. Epub 2013 Feb 12.

12.

Targeting of dicer-2 and RNA by a viral RNA silencing suppressor in Drosophila cells.

Qi N, Zhang L, Qiu Y, Wang Z, Si J, Liu Y, Xiang X, Xie J, Qin CF, Zhou X, Hu Y.

J Virol. 2012 May;86(10):5763-73. doi: 10.1128/JVI.07229-11. Epub 2012 Mar 21.

13.

Mosquito and Drosophila entomobirnaviruses suppress dsRNA- and siRNA-induced RNAi.

van Cleef KW, van Mierlo JT, Miesen P, Overheul GJ, Fros JJ, Schuster S, Marklewitz M, Pijlman GP, Junglen S, van Rij RP.

Nucleic Acids Res. 2014 Jul;42(13):8732-44. doi: 10.1093/nar/gku528. Epub 2014 Jun 17.

14.

A dsRNA-binding protein of a complex invertebrate DNA virus suppresses the Drosophila RNAi response.

Bronkhorst AW, van Cleef KW, Venselaar H, van Rij RP.

Nucleic Acids Res. 2014 Oct 29;42(19):12237-48. doi: 10.1093/nar/gku910. Epub 2014 Oct 1.

15.

Structural and functional analysis of viral siRNAs.

Szittya G, Moxon S, Pantaleo V, Toth G, Rusholme Pilcher RL, Moulton V, Burgyan J, Dalmay T.

PLoS Pathog. 2010 Apr 1;6(4):e1000838. doi: 10.1371/journal.ppat.1000838.

16.

Antiviral RNA interference in mammalian cells.

Maillard PV, Ciaudo C, Marchais A, Li Y, Jay F, Ding SW, Voinnet O.

Science. 2013 Oct 11;342(6155):235-8. doi: 10.1126/science.1241930.

17.

Dicer assay in Drosophila S2 cell extract.

Yang B, Li H.

Methods Mol Biol. 2011;721:215-29. doi: 10.1007/978-1-61779-037-9_13.

PMID:
21431688
18.

Molecular dissection of Flock house virus protein B2 reveals that electrostatic interactions between N-terminal domains of B2 monomers are critical for dimerization.

Seo JK, Kwon SJ, Rao AL.

Virology. 2012 Oct 25;432(2):296-305. doi: 10.1016/j.virol.2012.05.023. Epub 2012 Jun 19.

19.

Small RNAs tackle large viruses: RNA interference-based antiviral defense against DNA viruses in insects.

Bronkhorst AW, Miesen P, van Rij RP.

Fly (Austin). 2013 Oct-Dec;7(4):216-23. doi: 10.4161/fly.25708. Epub 2013 Aug 23.

20.

Deep sequencing of virus-infected cells reveals HIV-encoded small RNAs.

Schopman NC, Willemsen M, Liu YP, Bradley T, van Kampen A, Baas F, Berkhout B, Haasnoot J.

Nucleic Acids Res. 2012 Jan;40(1):414-27. doi: 10.1093/nar/gkr719. Epub 2011 Sep 12.

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