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Items: 1 to 20 of 129

1.

A novel three-unit tRNA splicing endonuclease found in ultrasmall Archaea possesses broad substrate specificity.

Fujishima K, Sugahara J, Miller CS, Baker BJ, Di Giulio M, Takesue K, Sato A, Tomita M, Banfield JF, Kanai A.

Nucleic Acids Res. 2011 Dec;39(22):9695-704. doi: 10.1093/nar/gkr692. Epub 2011 Aug 31.

2.

X-ray structure of the fourth type of archaeal tRNA splicing endonuclease: insights into the evolution of a novel three-unit composition and a unique loop involved in broad substrate specificity.

Hirata A, Fujishima K, Yamagami R, Kawamura T, Banfield JF, Kanai A, Hori H.

Nucleic Acids Res. 2012 Nov 1;40(20):10554-66. doi: 10.1093/nar/gks826. Epub 2012 Aug 31.

3.

The heteromeric Nanoarchaeum equitans splicing endonuclease cleaves noncanonical bulge-helix-bulge motifs of joined tRNA halves.

Randau L, Calvin K, Hall M, Yuan J, Podar M, Li H, Söll D.

Proc Natl Acad Sci U S A. 2005 Dec 13;102(50):17934-9. Epub 2005 Dec 5.

4.

Coevolution of tRNA intron motifs and tRNA endonuclease architecture in Archaea.

Tocchini-Valentini GD, Fruscoloni P, Tocchini-Valentini GP.

Proc Natl Acad Sci U S A. 2005 Oct 25;102(43):15418-22. Epub 2005 Oct 12.

5.

RNA-splicing endonuclease structure and function.

Calvin K, Li H.

Cell Mol Life Sci. 2008 Apr;65(7-8):1176-85. doi: 10.1007/s00018-008-7393-y. Review.

PMID:
18217203
6.

RNA recognition and cleavage by a splicing endonuclease.

Xue S, Calvin K, Li H.

Science. 2006 May 12;312(5775):906-10.

8.

Conservation of substrate recognition mechanisms by tRNA splicing endonucleases.

Fabbri S, Fruscoloni P, Bufardeci E, Di Nicola Negri E, Baldi MI, Attardi DG, Mattoccia E, Tocchini-Valentini GP.

Science. 1998 Apr 10;280(5361):284-6.

9.

Cleavage of pre-tRNAs by the splicing endonuclease requires a composite active site.

Trotta CR, Paushkin SV, Patel M, Li H, Peltz SW.

Nature. 2006 May 18;441(7091):375-7.

PMID:
16710424
10.

Identification of a human endonuclease complex reveals a link between tRNA splicing and pre-mRNA 3' end formation.

Paushkin SV, Patel M, Furia BS, Peltz SW, Trotta CR.

Cell. 2004 Apr 30;117(3):311-21.

11.

Structural and mutational analysis of tRNA intron-splicing endonuclease from Thermoplasma acidophilum DSM 1728: catalytic mechanism of tRNA intron-splicing endonucleases.

Kim YK, Mizutani K, Rhee KH, Nam KH, Lee WH, Lee EH, Kim EE, Park SY, Hwang KY.

J Bacteriol. 2007 Nov;189(22):8339-46. Epub 2007 Sep 7.

12.

Comprehensive analysis of archaeal tRNA genes reveals rapid increase of tRNA introns in the order thermoproteales.

Sugahara J, Kikuta K, Fujishima K, Yachie N, Tomita M, Kanai A.

Mol Biol Evol. 2008 Dec;25(12):2709-16. doi: 10.1093/molbev/msn216. Epub 2008 Oct 1.

PMID:
18832079
13.

Structure, function, and evolution of the tRNA endonucleases of Archaea: an example of subfunctionalization.

Tocchini-Valentini GD, Fruscoloni P, Tocchini-Valentini GP.

Proc Natl Acad Sci U S A. 2005 Jun 21;102(25):8933-8. Epub 2005 Jun 3.

14.

The dawn of dominance by the mature domain in tRNA splicing.

Tocchini-Valentini GD, Fruscoloni P, Tocchini-Valentini GP.

Proc Natl Acad Sci U S A. 2007 Jul 24;104(30):12300-5. Epub 2007 Jul 16.

15.

Structural characterization of the catalytic subunit of a novel RNA splicing endonuclease.

Calvin K, Hall MD, Xu F, Xue S, Li H.

J Mol Biol. 2005 Nov 11;353(5):952-60. Epub 2005 Sep 30.

PMID:
16219321
17.

Avatar pre-tRNAs help elucidate the properties of tRNA-splicing endonucleases that produce tRNA from permuted genes.

Tocchini-Valentini GD, Tocchini-Valentini GP.

Proc Natl Acad Sci U S A. 2012 Dec 26;109(52):21325-9. doi: 10.1073/pnas.1219336110. Epub 2012 Dec 11.

18.

The yeast tRNA splicing endonuclease: a tetrameric enzyme with two active site subunits homologous to the archaeal tRNA endonucleases.

Trotta CR, Miao F, Arn EA, Stevens SW, Ho CK, Rauhut R, Abelson JN.

Cell. 1997 Jun 13;89(6):849-58.

20.

A conserved lysine residue in the crenarchaea-specific loop is important for the crenarchaeal splicing endonuclease activity.

Okuda M, Shiba T, Inaoka DK, Kita K, Kurisu G, Mineki S, Harada S, Watanabe Y, Yoshinari S.

J Mol Biol. 2011 Jan 7;405(1):92-104. doi: 10.1016/j.jmb.2010.10.050. Epub 2010 Nov 2.

PMID:
21050862

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