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Items: 1 to 20 of 79

1.

Integrated online system for a pyrosequencing-based microbial source tracking method that targets Bacteroidetes 16S rDNA.

Unno T, Di DY, Jang J, Suh YS, Sadowsky MJ, Hur HG.

Environ Sci Technol. 2012 Jan 3;46(1):93-8. doi: 10.1021/es201380c. Epub 2011 Aug 2.

PMID:
21780740
2.

Use of barcoded pyrosequencing and shared OTUs to determine sources of fecal bacteria in watersheds.

Unno T, Jang J, Han D, Kim JH, Sadowsky MJ, Kim OS, Chun J, Hur HG.

Environ Sci Technol. 2010 Oct 15;44(20):7777-82. doi: 10.1021/es101500z.

PMID:
20853824
3.
4.

Assessing hog lagoon waste contamination in the Cape Fear Watershed using Bacteroidetes 16S rRNA gene pyrosequencing.

Arfken AM, Song B, Mallin MA.

Appl Microbiol Biotechnol. 2015 Sep;99(17):7283-93. doi: 10.1007/s00253-015-6784-x. Epub 2015 Jul 19.

PMID:
26189016
5.

Identification of host-specific Bacteroidales 16S rDNA sequences from human sewage and ruminant feces.

Dorai-Raj S, O'Grady J, Cormican M, Colleran E.

J Basic Microbiol. 2012 Jun;52(3):277-84. doi: 10.1002/jobm.201100184. Epub 2011 Sep 23.

PMID:
21953034
6.

A diverse bacterial community in an anoxic quinoline-degrading bioreactor determined by using pyrosequencing and clone library analysis.

Zhang X, Yue S, Zhong H, Hua W, Chen R, Cao Y, Zhao L.

Appl Microbiol Biotechnol. 2011 Jul;91(2):425-34. doi: 10.1007/s00253-011-3296-1. Epub 2011 May 3.

PMID:
21538111
7.

Assessment of fecal pollution sources in a small northern-plains watershed using PCR and phylogenetic analyses of Bacteroidetes 16S rRNA gene.

Lamendella R, Domingo JW, Oerther DB, Vogel JR, Stoeckel DM.

FEMS Microbiol Ecol. 2007 Mar;59(3):651-60. Epub 2006 Oct 1.

8.

A high-throughput and quantitative hierarchical oligonucleotide primer extension (HOPE)-based approach to identify sources of faecal contamination in water bodies.

Hong PY, Wu JH, Liu WT.

Environ Microbiol. 2009 Jul;11(7):1672-81. doi: 10.1111/j.1462-2920.2009.01892.x. Epub 2009 Feb 13.

PMID:
19222540
9.

Analysis of human and animal fecal microbiota for microbial source tracking.

Lee JE, Lee S, Sung J, Ko G.

ISME J. 2011 Feb;5(2):362-5. doi: 10.1038/ismej.2010.120. Epub 2010 Aug 5.

10.

Molecular diversity of Bacteroidales in fecal and environmental samples and swine-associated subpopulations.

Lamendella R, Li KC, Oerther D, Santo Domingo JW.

Appl Environ Microbiol. 2013 Feb;79(3):816-24. doi: 10.1128/AEM.02535-12. Epub 2012 Nov 16.

11.

Quantitative identification of fecal water pollution sources by TaqMan real-time PCR assays using Bacteroidales 16S rRNA genetic markers.

Lee DY, Weir SC, Lee H, Trevors JT.

Appl Microbiol Biotechnol. 2010 Dec;88(6):1373-83. doi: 10.1007/s00253-010-2880-0. Epub 2010 Sep 25.

PMID:
20871990
12.

Evaluation of host-specific Bacteroidales 16S rRNA gene markers as a complementary tool for detecting fecal pollution in a prairie watershed.

Fremaux B, Gritzfeld J, Boa T, Yost CK.

Water Res. 2009 Nov;43(19):4838-49. doi: 10.1016/j.watres.2009.06.045. Epub 2009 Jun 27.

PMID:
19604534
13.

[Uncultivated host-specific Bacteroidales markers identification of fecal source pollution--a review].

Zhang X, Zhu C, Zhu H.

Wei Sheng Wu Xue Bao. 2011 Jul;51(7):863-8. Review. Chinese.

PMID:
22043786
14.

Microbial community analysis and identification of alternative host-specific fecal indicators in fecal and river water samples using pyrosequencing.

Jeong JY, Park HD, Lee KH, Weon HY, Ka JO.

J Microbiol. 2011 Aug;49(4):585-94. doi: 10.1007/s12275-011-0530-6. Epub 2011 Sep 2.

PMID:
21887641
15.

Phylogenetic characterization of fecal microbial communities of dogs fed diets with or without supplemental dietary fiber using 454 pyrosequencing.

Middelbos IS, Vester Boler BM, Qu A, White BA, Swanson KS, Fahey GC Jr.

PLoS One. 2010 Mar 22;5(3):e9768. doi: 10.1371/journal.pone.0009768.

16.

Bacteroidales diversity in ring-billed gulls (Laurus delawarensis) residing at Lake Michigan beaches.

Jeter SN, McDermott CM, Bower PA, Kinzelman JL, Bootsma MJ, Goetz GW, McLellan SL.

Appl Environ Microbiol. 2009 Mar;75(6):1525-33. doi: 10.1128/AEM.02261-08. Epub 2009 Jan 16.

17.

Relative abundance of Bacteroides spp. in stools and wastewaters as determined by hierarchical oligonucleotide primer extension.

Hong PY, Wu JH, Liu WT.

Appl Environ Microbiol. 2008 May;74(9):2882-93. doi: 10.1128/AEM.02568-07. Epub 2008 Mar 14.

18.

High diversity and differential persistence of fecal Bacteroidales population spiked into freshwater microcosm.

Liang Z, He Z, Zhou X, Powell CA, Yang Y, Roberts MG, Stoffella PJ.

Water Res. 2012 Jan 1;46(1):247-57. doi: 10.1016/j.watres.2011.11.004. Epub 2011 Nov 9.

PMID:
22100053
19.

Identifying fecal sources in a selected catchment reach using multiple source-tracking tools.

Vogel JR, Stoeckel DM, Lamendella R, Zelt RB, Santo Domingo JW, Walker SR, Oerther DB.

J Environ Qual. 2007 Apr 5;36(3):718-29. Print 2007 May-Jun.

PMID:
17412907
20.

Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing.

Kröber M, Bekel T, Diaz NN, Goesmann A, Jaenicke S, Krause L, Miller D, Runte KJ, Viehöver P, Pühler A, Schlüter A.

J Biotechnol. 2009 Jun 1;142(1):38-49. doi: 10.1016/j.jbiotec.2009.02.010. Epub 2009 Feb 27.

PMID:
19480946

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