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Items: 1 to 20 of 105

1.

Phenotype mining for functional genomics and gene discovery.

Groth P, Leser U, Weiss B.

Methods Mol Biol. 2011;760:159-73. doi: 10.1007/978-1-61779-176-5_10.

PMID:
21779996
2.

PhenomicDB: a new cross-species genotype/phenotype resource.

Groth P, Pavlova N, Kalev I, Tonov S, Georgiev G, Pohlenz HD, Weiss B.

Nucleic Acids Res. 2007 Jan;35(Database issue):D696-9. Epub 2006 Sep 18.

3.

PhenomicDB: a multi-species genotype/phenotype database for comparative phenomics.

Kahraman A, Avramov A, Nashev LG, Popov D, Ternes R, Pohlenz HD, Weiss B.

Bioinformatics. 2005 Feb 1;21(3):418-20. Epub 2004 Sep 16.

PMID:
15374875
4.

A random set scoring model for prioritization of disease candidate genes using protein complexes and data-mining of GeneRIF, OMIM and PubMed records.

Jiang L, Edwards SM, Thomsen B, Workman CT, Guldbrandtsen B, Sørensen P.

BMC Bioinformatics. 2014 Sep 24;15:315. doi: 10.1186/1471-2105-15-315.

5.

Target discovery from data mining approaches.

Yang Y, Adelstein SJ, Kassis AI.

Drug Discov Today. 2009 Feb;14(3-4):147-54. doi: 10.1016/j.drudis.2008.12.005. Epub 2009 Jan 20. Review.

PMID:
19135549
6.

Mining phenotypes for gene function prediction.

Groth P, Weiss B, Pohlenz HD, Leser U.

BMC Bioinformatics. 2008 Mar 3;9:136. doi: 10.1186/1471-2105-9-136.

7.

The Mouse Genome Database genotypes::phenotypes.

Blake JA, Bult CJ, Eppig JT, Kadin JA, Richardson JE; Mouse Genome Database Group.

Nucleic Acids Res. 2009 Jan;37(Database issue):D712-9. doi: 10.1093/nar/gkn886. Epub 2008 Nov 3.

8.

Functional genomics and proteomics in the clinical neurosciences: data mining and bioinformatics.

Phan JH, Quo CF, Wang MD.

Prog Brain Res. 2006;158:83-108. Review.

PMID:
17027692
9.

The mouse genome database (MGD): new features facilitating a model system.

Eppig JT, Blake JA, Bult CJ, Kadin JA, Richardson JE; Mouse Genome Database Group.

Nucleic Acids Res. 2007 Jan;35(Database issue):D630-7. Epub 2006 Nov 29.

10.

Phenoclustering: online mining of cross-species phenotypes.

Groth P, Kalev I, Kirov I, Traikov B, Leser U, Weiss B.

Bioinformatics. 2010 Aug 1;26(15):1924-5. doi: 10.1093/bioinformatics/btq311. Epub 2010 Jun 18.

11.

Phenomics: expanding the role of clinical evaluation in genomic studies.

Lanktree MB, Hassell RG, Lahiry P, Hegele RA.

J Investig Med. 2010 Jun;58(5):700-6. doi: 10.231/JIM.0b013e3181d844f7. Review.

PMID:
20216460
12.

A text-mining analysis of the human phenome.

van Driel MA, Bruggeman J, Vriend G, Brunner HG, Leunissen JA.

Eur J Hum Genet. 2006 May;14(5):535-42.

13.

Literature-aided interpretation of gene expression data with the weighted global test.

Jelier R, Goeman JJ, Hettne KM, Schuemie MJ, den Dunnen JT, 't Hoen PA.

Brief Bioinform. 2011 Sep;12(5):518-29. doi: 10.1093/bib/bbq082. Epub 2010 Dec 22. Review.

PMID:
21183478
14.

Integrative literature and data mining to rank disease candidate genes.

Wu C, Zhu C, Jegga AG.

Methods Mol Biol. 2014;1159:207-26. doi: 10.1007/978-1-4939-0709-0_12. Review.

PMID:
24788269
15.

A prioritization analysis of disease association by data-mining of functional annotation of human genes.

Taniya T, Tanaka S, Yamaguchi-Kabata Y, Hanaoka H, Yamasaki C, Maekawa H, Barrero RA, Lenhard B, Datta MW, Shimoyama M, Bumgarner R, Chakraborty R, Hopkinson I, Jia L, Hide W, Auffray C, Minoshima S, Imanishi T, Gojobori T.

Genomics. 2012 Jan;99(1):1-9. doi: 10.1016/j.ygeno.2011.10.002. Epub 2011 Oct 14.

16.

An integrative genomics strategy for systematic characterization of genetic loci modulating phenotypes.

Bao L, Peirce JL, Zhou M, Li H, Goldowitz D, Williams RW, Lu L, Cui Y.

Hum Mol Genet. 2007 Jun 1;16(11):1381-90. Epub 2007 Apr 11.

PMID:
17428815
17.

Integration of bioinformatics resources for functional analysis of gene expression and proteomic data.

Huang H, Hu ZZ, Arighi CN, Wu CH.

Front Biosci. 2007 Sep 1;12:5071-88. Review.

PMID:
17569631
18.

Rationale and study design of the CardioGene Study: genomics of in-stent restenosis.

Ganesh SK, Skelding KA, Mehta L, O'Neill K, Joo J, Zheng G, Goldstein J, Simari R, Billings E, Geller NL, Holmes D, O'Neill WW, Nabel EG.

Pharmacogenomics. 2004 Oct;5(7):952-1004.

PMID:
15469413
19.

Kernel-based data fusion for gene prioritization.

De Bie T, Tranchevent LC, van Oeffelen LM, Moreau Y.

Bioinformatics. 2007 Jul 1;23(13):i125-32.

PMID:
17646288
20.

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