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Items: 1 to 20 of 113

1.

Linkage of cation binding and folding in human telomeric quadruplex DNA.

Gray RD, Chaires JB.

Biophys Chem. 2011 Nov;159(1):205-9. doi: 10.1016/j.bpc.2011.06.012. Epub 2011 Jun 28.

2.

Characterization of a K+-induced conformational switch in a human telomeric DNA oligonucleotide using 2-aminopurine fluorescence.

Gray RD, Petraccone L, Trent JO, Chaires JB.

Biochemistry. 2010 Jan 12;49(1):179-94. doi: 10.1021/bi901357r.

3.

Energetic basis of human telomeric DNA folding into G-quadruplex structures.

Bončina M, Lah J, Prislan I, Vesnaver G.

J Am Chem Soc. 2012 Jun 13;134(23):9657-63. doi: 10.1021/ja300605n. Epub 2012 Jun 1.

PMID:
22594380
4.

Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution.

Ambrus A, Chen D, Dai J, Bialis T, Jones RA, Yang D.

Nucleic Acids Res. 2006 May 19;34(9):2723-35. Print 2006.

5.

Kinetics and mechanism of K+- and Na+-induced folding of models of human telomeric DNA into G-quadruplex structures.

Gray RD, Chaires JB.

Nucleic Acids Res. 2008 Jul;36(12):4191-203. doi: 10.1093/nar/gkn379. Epub 2008 Jun 21.

6.

Folding of the thrombin aptamer into a G-quadruplex with Sr(2+): stability, heat, and hydration.

Kankia BI, Marky LA.

J Am Chem Soc. 2001 Nov 7;123(44):10799-804.

PMID:
11686680
7.

Origin of Ion Specificity of Telomeric DNA G-Quadruplexes Investigated by Free-Energy Simulations.

Siebenmorgen T, Zacharias M.

Biophys J. 2017 Jun 6;112(11):2280-2290. doi: 10.1016/j.bpj.2017.04.036.

PMID:
28591601
8.

Folding and unfolding pathways of the human telomeric G-quadruplex.

Gray RD, Trent JO, Chaires JB.

J Mol Biol. 2014 Apr 17;426(8):1629-50. doi: 10.1016/j.jmb.2014.01.009. Epub 2014 Jan 31.

9.

Structural switch of telomere DNA by pH and monovalent cation.

Inoue M, Miyoshi D, Sugimoto N.

Nucleic Acids Symp Ser (Oxf). 2005;(49):243-4.

PMID:
17150724
10.

Isothermal folding of G-quadruplexes.

Gray RD, Chaires JB.

Methods. 2012 May;57(1):47-55. doi: 10.1016/j.ymeth.2012.04.006. Epub 2012 Apr 16.

11.

Induction of G-quadruplex DNA structure by Zn(II) 5,10,15,20-tetrakis(N-methyl-4-pyridyl)porphyrin.

Bhattacharjee AJ, Ahluwalia K, Taylor S, Jin O, Nicoludis JM, Buscaglia R, Brad Chaires J, Kornfilt DJ, Marquardt DG, Yatsunyk LA.

Biochimie. 2011 Aug;93(8):1297-309. doi: 10.1016/j.biochi.2011.05.038. Epub 2011 Jun 12.

PMID:
21679743
12.

Telomestatin and diseleno sapphyrin bind selectively to two different forms of the human telomeric G-quadruplex structure.

Rezler EM, Seenisamy J, Bashyam S, Kim MY, White E, Wilson WD, Hurley LH.

J Am Chem Soc. 2005 Jul 6;127(26):9439-47.

PMID:
15984871
13.

Interactions of actinomycin D with human telomeric G-quadruplex DNA.

Hudson JS, Brooks SC, Graves DE.

Biochemistry. 2009 Jun 2;48(21):4440-7. doi: 10.1021/bi900203z.

14.

Lowering the overall charge on TMPyP4 improves its selectivity for G-quadruplex DNA.

Ruan TL, Davis SJ, Powell BM, Harbeck CP, Habdas J, Habdas P, Yatsunyk LA.

Biochimie. 2017 Jan;132:121-130. doi: 10.1016/j.biochi.2016.11.003. Epub 2016 Nov 10.

PMID:
27840085
15.

Unfolding of G-quadruplexes: energetic, and ion and water contributions of G-quartet stacking.

Olsen CM, Gmeiner WH, Marky LA.

J Phys Chem B. 2006 Apr 6;110(13):6962-9.

PMID:
16571009
16.

Dominant Driving Forces in Human Telomere Quadruplex Binding-Induced Structural Alterations.

Bončina M, Hamon F, Islam B, Teulade-Fichou MP, Vesnaver G, Haider S, Lah J.

Biophys J. 2015 Jun 16;108(12):2903-11. doi: 10.1016/j.bpj.2015.05.001.

17.

Cross-links of quadruplex structures from human telomeric DNA by dinuclear platinum complexes show the flexibility of both structures.

Ourliac-Garnier I, Elizondo-Riojas MA, Redon S, Farrell NP, Bombard S.

Biochemistry. 2005 Aug 9;44(31):10620-34.

PMID:
16060671
18.
19.

Direct measurement of sequential folding pathway and energy landscape of human telomeric G-quadruplex structures.

Li W, Hou XM, Wang PY, Xi XG, Li M.

J Am Chem Soc. 2013 May 1;135(17):6423-6. doi: 10.1021/ja4019176. Epub 2013 Apr 23.

PMID:
23631592
20.

Crystal structure of parallel quadruplexes from human telomeric DNA.

Parkinson GN, Lee MP, Neidle S.

Nature. 2002 Jun 20;417(6891):876-80. Epub 2002 May 26.

PMID:
12050675

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