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Items: 1 to 20 of 91

1.

Newly developed primers for complete ycf1 amplification in Pinus (Pinaceae) chloroplasts with possible family-wide utility.

Parks M, Liston A, Cronn R.

Am J Bot. 2011 Jul;98(7):e185-8. doi: 10.3732/ajb.1100088. Epub 2011 Jun 17.

2.

Isolation and characterization of tetranucleotide microsatellite loci in Pinus massoniana (Pinaceae).

Guan L, Suharyanto, Shiraishi S.

Am J Bot. 2011 Aug;98(8):e216-7. doi: 10.3732/ajb.1100076. Epub 2011 Jul 27.

3.

Low nucleotide diversity at the pal1 locus in the widely distributed Pinus sylvestris.

Dvornyk V, Sirviö A, Mikkonen M, Savolainen O.

Mol Biol Evol. 2002 Feb;19(2):179-88.

PMID:
11801746
4.

Novel computational methods for increasing PCR primer design effectiveness in directed sequencing.

Li K, Brownley A, Stockwell TB, Beeson K, McIntosh TC, Busam D, Ferriera S, Murphy S, Levy S.

BMC Bioinformatics. 2008 Apr 11;9:191. doi: 10.1186/1471-2105-9-191.

5.

Cross-species transferability of SSR loci developed from transciptome sequencing in lodgepole pine.

Lesser MR, Parchman TL, Buerkle CA.

Mol Ecol Resour. 2012 May;12(3):448-55. doi: 10.1111/j.1755-0998.2011.03102.x. Epub 2011 Dec 15.

PMID:
22171820
6.

A new approach to improve the scoring of mononucleotide microsatellite loci.

Flores-Rentería L, Whipple AV.

Am J Bot. 2011 Mar;98(3):e51-3. doi: 10.3732/ajb.1000428. Epub 2011 Feb 25.

7.

Spatially variable natural selection and the divergence between parapatric subspecies of lodgepole pine (Pinus contorta, Pinaceae).

Eckert AJ, Shahi H, Datwyler SL, Neale DB.

Am J Bot. 2012 Aug;99(8):1323-34. doi: 10.3732/ajb.1200055. Epub 2012 Jul 26.

8.

Exon-primed, intron-crossing (EPIC) loci for five nuclear genes in deep-sea protobranch bivalves: primer design, PCR protocols and locus utility.

Jennings RM, Etter RJ.

Mol Ecol Resour. 2011 Nov;11(6):1102-12. doi: 10.1111/j.1755-0998.2011.03038.x. Epub 2011 Jun 20.

PMID:
21689382
9.

Nuclear microsatellites for Pinus pinea (Pinaceae), a genetically depauperate tree, and their transferability to P. halepensis.

Pinzauti F, Sebastiani F, Budde KB, Fady B, González-Martínez SC, Vendramin GG.

Am J Bot. 2012 Sep;99(9):e362-5. doi: 10.3732/ajb.1200064. Epub 2012 Aug 30.

10.

Design and analysis of PCR primers for the amplification and cloning of human immunoglobulin Fab fragments.

de Boer M, Chang SY, Eichinger G, Wong HC.

Hum Antibodies Hybridomas. 1994;5(1-2):57-64.

PMID:
7858184
11.

PCR primers for an aldolase-B intron in acanthopterygian fishes.

Quattro JM, Jones WJ, Oswald KJ.

BMC Evol Biol. 2001;1:9. Epub 2001 Nov 5.

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Separating the wheat from the chaff: mitigating the effects of noise in a plastome phylogenomic data set from Pinus L. (Pinaceae).

Parks M, Cronn R, Liston A.

BMC Evol Biol. 2012 Jun 25;12:100. doi: 10.1186/1471-2148-12-100.

15.

A mitochondrial DNA minisatellite reveals the postglacial history of jack pine (Pinus banksiana), a broad-range North American conifer.

Godbout J, Jaramillo-Correa JP, Beaulieu J, Bousquet J.

Mol Ecol. 2005 Oct;14(11):3497-512.

PMID:
16156818
16.
17.

Complete sequencing and comparative analyses of the pepper (Capsicum annuum L.) plastome revealed high frequency of tandem repeats and large insertion/deletions on pepper plastome.

Jo YD, Park J, Kim J, Song W, Hur CG, Lee YH, Kang BC.

Plant Cell Rep. 2011 Feb;30(2):217-29. doi: 10.1007/s00299-010-0929-2. Epub 2010 Oct 27.

PMID:
20978766
18.

A set of plastid loci for use in multiplex fragment length genotyping for intraspecific variation in Pinus (Pinaceae).

Wofford AM, Finch K, Bigott A, Willyard A.

Appl Plant Sci. 2014 Apr 30;2(5). pii: apps.1400002. doi: 10.3732/apps.1400002. eCollection 2014 May.

19.

Rapid assessment of single-copy nuclear DNA variation in diverse species.

Slade RW, Moritz C, Heideman A, Hale PT.

Mol Ecol. 1993 Dec;2(6):359-73.

PMID:
7909260
20.

RExPrimer: an integrated primer designing tool increases PCR effectiveness by avoiding 3' SNP-in-primer and mis-priming from structural variation.

Piriyapongsa J, Ngamphiw C, Assawamakin A, Wangkumhang P, Suwannasri P, Ruangrit U, Agavatpanitch G, Tongsima S.

BMC Genomics. 2009 Dec 3;10 Suppl 3:S4. doi: 10.1186/1471-2164-10-S3-S4.

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