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Items: 1 to 20 of 99

1.
2.

Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate.

Denoeud F, Henriet S, Mungpakdee S, Aury JM, Da Silva C, Brinkmann H, Mikhaleva J, Olsen LC, Jubin C, Cañestro C, Bouquet JM, Danks G, Poulain J, Campsteijn C, Adamski M, Cross I, Yadetie F, Muffato M, Louis A, Butcher S, Tsagkogeorga G, Konrad A, Singh S, Jensen MF, Huynh Cong E, Eikeseth-Otteraa H, Noel B, Anthouard V, Porcel BM, Kachouri-Lafond R, Nishino A, Ugolini M, Chourrout P, Nishida H, Aasland R, Huzurbazar S, Westhof E, Delsuc F, Lehrach H, Reinhardt R, Weissenbach J, Roy SW, Artiguenave F, Postlethwait JH, Manak JR, Thompson EM, Jaillon O, Du Pasquier L, Boudinot P, Liberles DA, Volff JN, Philippe H, Lenhard B, Roest Crollius H, Wincker P, Chourrout D.

Science. 2010 Dec 3;330(6009):1381-5. doi: 10.1126/science.1194167. Epub 2010 Nov 18.

3.

Hypervariable and highly divergent intron-exon organizations in the chordate Oikopleura dioica.

Edvardsen RB, Lerat E, Maeland AD, Flåt M, Tewari R, Jensen MF, Lehrach H, Reinhardt R, Seo HC, Chourrout D.

J Mol Evol. 2004 Oct;59(4):448-57.

PMID:
15638456
4.

Retroelement dynamics and a novel type of chordate retrovirus-like element in the miniature genome of the tunicate Oikopleura dioica.

Volff JN, Lehrach H, Reinhardt R, Chourrout D.

Mol Biol Evol. 2004 Nov;21(11):2022-33. Epub 2004 Jul 14.

PMID:
15254255
5.

Rapidly evolving lamins in a chordate, Oikopleura dioica, with unusual nuclear architecture.

Clarke T, Bouquet JM, Fu X, Kallesøe T, Schmid M, Thompson EM.

Gene. 2007 Jul 1;396(1):159-69. Epub 2007 Mar 23.

PMID:
17449201
6.

Spliced-leader RNA trans splicing in a chordate, Oikopleura dioica, with a compact genome.

Ganot P, Kallesøe T, Reinhardt R, Chourrout D, Thompson EM.

Mol Cell Biol. 2004 Sep;24(17):7795-805.

7.

Peculiar patterns of amino acid substitution and conservation in the fast evolving tunicate Oikopleura dioica.

Berná L, D'Onofrio G, Alvarez-Valin F.

Mol Phylogenet Evol. 2012 Feb;62(2):708-17. doi: 10.1016/j.ympev.2011.11.013. Epub 2011 Nov 23.

PMID:
22120064
8.

Evolutionary genomics of fast evolving tunicates.

Berná L, Alvarez-Valin F.

Genome Biol Evol. 2014 Jul 8;6(7):1724-38. doi: 10.1093/gbe/evu122. Review.

9.

Altered miRNA repertoire in the simplified chordate, Oikopleura dioica.

Fu X, Adamski M, Thompson EM.

Mol Biol Evol. 2008 Jun;25(6):1067-80. doi: 10.1093/molbev/msn060. Epub 2008 Mar 13.

PMID:
18339653
10.
11.

Conserved patterns of nuclear compartmentalization are not observed in the chordate Oikopleura.

Spada F, Koch J, Sadoni N, Mitchell N, Ganot P, De Boni U, Zink D, Thompson EM.

Biol Cell. 2007 May;99(5):273-87.

PMID:
17288541
12.
13.

Identifying the mechanisms of intron gain: progress and trends.

Yenerall P, Zhou L.

Biol Direct. 2012 Sep 10;7:29. doi: 10.1186/1745-6150-7-29. Review.

14.

Systematic analysis of intron size and abundance parameters in diverse lineages.

Wu J, Xiao J, Wang L, Zhong J, Yin H, Wu S, Zhang Z, Yu J.

Sci China Life Sci. 2013 Oct;56(10):968-74.

PMID:
24022126
15.

Histone variant innovation in a rapidly evolving chordate lineage.

Moosmann A, Campsteijn C, Jansen PW, Nasrallah C, Raasholm M, Stunnenberg HG, Thompson EM.

BMC Evol Biol. 2011 Jul 15;11:208. doi: 10.1186/1471-2148-11-208.

16.

Selective forces for the origin of spliceosomes.

Vesteg M, Sándorová Z, Krajčovič J.

J Mol Evol. 2012 Apr;74(3-4):226-31. doi: 10.1007/s00239-012-9494-3. Epub 2012 Mar 11.

PMID:
22407435
17.

The evolution of spliceosomal introns.

Lynch M, Richardson AO.

Curr Opin Genet Dev. 2002 Dec;12(6):701-10. Review.

PMID:
12433585
18.

The evolution of spliceosomal introns: patterns, puzzles and progress.

Roy SW, Gilbert W.

Nat Rev Genet. 2006 Mar;7(3):211-21. Review.

PMID:
16485020
19.

Intron-dominated genomes of early ancestors of eukaryotes.

Koonin EV.

J Hered. 2009 Sep-Oct;100(5):618-23. doi: 10.1093/jhered/esp056. Epub 2009 Jul 17. Review.

20.

Miniature genome in the marine chordate Oikopleura dioica.

Seo HC, Kube M, Edvardsen RB, Jensen MF, Beck A, Spriet E, Gorsky G, Thompson EM, Lehrach H, Reinhardt R, Chourrout D.

Science. 2001 Dec 21;294(5551):2506. No abstract available. Erratum in: Science 2002 Jan 4;295(5552):45.

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