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Items: 1 to 20 of 75

1.
2.

Identification of single nucleotide polymorphism in ginger using expressed sequence tags.

Chandrasekar A, Riju A, Sithara K, Anoop S, Eapen SJ.

Bioinformation. 2009 Sep 30;4(3):119-22.

3.

Redundancy based detection of sequence polymorphisms in expressed sequence tag data using autoSNP.

Barker G, Batley J, O' Sullivan H, Edwards KJ, Edwards D.

Bioinformatics. 2003 Feb 12;19(3):421-2.

PMID:
12584131
4.

EST-derived single nucleotide polymorphism markers for assembling genetic and physical maps of the barley genome.

Kota R, Varshney RK, Prasad M, Zhang H, Stein N, Graner A.

Funct Integr Genomics. 2008 Aug;8(3):223-33.

PMID:
17968603
5.

Mining for SNPs and SSRs using SNPServer, dbSNP and SSR taxonomy tree.

Batley J, Edwards D.

Methods Mol Biol. 2009;537:303-21. doi: 10.1007/978-1-59745-251-9_15.

PMID:
19378151
6.

SSR mining in oil palm EST database: application in oil palm germplasm diversity studies.

Ting NC, Zaki NM, Rosli R, Low ET, Ithnin M, Cheah SC, Tan SG, Singh R.

J Genet. 2010 Aug;89(2):135-45.

7.

High-throughput identification, database storage and analysis of SNPs in EST sequences.

Useche FJ, Gao G, Harafey M, Rafalski A.

Genome Inform. 2001;12:194-203.

PMID:
11791238
8.

SSRs and INDELs mined from the sunflower EST database: abundance, polymorphisms, and cross-taxa utility.

Heesacker A, Kishore VK, Gao W, Tang S, Kolkman JM, Gingle A, Matvienko M, Kozik A, Michelmore RM, Lai Z, Rieseberg LH, Knapp SJ.

Theor Appl Genet. 2008 Nov;117(7):1021-9. doi: 10.1007/s00122-008-0841-0.

PMID:
18633591
9.

Insertion-deletion polymorphisms in 3' regions of maize genes occur frequently and can be used as highly informative genetic markers.

Bhattramakki D, Dolan M, Hanafey M, Wineland R, Vaske D, Register JC 3rd, Tingey SV, Rafalski A.

Plant Mol Biol. 2002 Mar-Apr;48(5-6):539-47.

PMID:
12004893
10.
11.

Mining of haplotype-based expressed sequence tag single nucleotide polymorphisms in citrus.

Chen C, Gmitter FG Jr.

BMC Genomics. 2013 Nov 1;14:746. doi: 10.1186/1471-2164-14-746.

12.

Snipping polymorphisms from large EST collections in barley (Hordeum vulgare L.).

Kota R, Rudd S, Facius A, Kolesov G, Thiel T, Zhang H, Stein N, Mayer K, Graner A.

Mol Genet Genomics. 2003 Oct;270(1):24-33.

PMID:
12938038
13.

Mining ESTs to determine the usefulness of SNPs across shrimp species.

Gorbach DM, Hu ZL, Du ZQ, Rothschild MF.

Anim Biotechnol. 2010 Apr;21(2):100-3. doi: 10.1080/10495390903323968.

PMID:
20379886
14.

HaploSNPer: a web-based allele and SNP detection tool.

Tang J, Leunissen JA, Voorrips RE, van der Linden CG, Vosman B.

BMC Genet. 2008 Feb 28;9:23. doi: 10.1186/1471-2156-9-23.

15.

Automated SNP detection in expressed sequence tags: statistical considerations and application to maritime pine sequences.

Dantec LL, Chagné D, Pot D, Cantin O, Garnier-Géré P, Bedon F, Frigerio JM, Chaumeil P, Léger P, Garcia V, Laigret F, De Daruvar A, Plomion C.

Plant Mol Biol. 2004 Feb;54(3):461-70.

PMID:
15284499
16.

Single nucleotide polymorphisms in rye (Secale cereale L.): discovery, frequency, and applications for genome mapping and diversity studies.

Varshney RK, Beier U, Khlestkina EK, Kota R, Korzun V, Graner A, Börner A.

Theor Appl Genet. 2007 Apr;114(6):1105-16.

PMID:
17345059
17.

High quality SNPs/Indels mining and characterization in ginger from ESTs data base.

Gaur M, Das A, Subudhi E.

Bioinformation. 2015 Feb 28;11(2):85-9. doi: 10.6026/97320630011085.

18.

Large-scale identification and analysis of genome-wide single-nucleotide polymorphisms for mapping in Arabidopsis thaliana.

Schmid KJ, Sorensen TR, Stracke R, Torjek O, Altmann T, Mitchell-Olds T, Weisshaar B.

Genome Res. 2003 Jun;13(6A):1250-7.

19.

Development and evaluation of single-nucleotide polymorphism markers in allotetraploid rapeseed (Brassica napus L.).

Westermeier P, Wenzel G, Mohler V.

Theor Appl Genet. 2009 Nov;119(7):1301-11. doi: 10.1007/s00122-009-1135-x.

PMID:
19756476
20.

Mining SNPs from EST databases.

Picoult-Newberg L, Ideker TE, Pohl MG, Taylor SL, Donaldson MA, Nickerson DA, Boyce-Jacino M.

Genome Res. 1999 Feb;9(2):167-74.

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