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Items: 1 to 20 of 101

1.

Reshuffling genomic landscapes to study the regulatory evolution of Hox gene clusters.

Tschopp P, Fraudeau N, Béna F, Duboule D.

Proc Natl Acad Sci U S A. 2011 Jun 28;108(26):10632-7. doi: 10.1073/pnas.1102985108. Epub 2011 Jun 13.

2.

A genetic approach to the transcriptional regulation of Hox gene clusters.

Tschopp P, Duboule D.

Annu Rev Genet. 2011;45:145-66. doi: 10.1146/annurev-genet-102209-163429. Review.

PMID:
22060042
3.

Evolution of conserved non-coding sequences within the vertebrate Hox clusters through the two-round whole genome duplications revealed by phylogenetic footprinting analysis.

Matsunami M, Sumiyama K, Saitou N.

J Mol Evol. 2010 Dec;71(5-6):427-36. doi: 10.1007/s00239-010-9396-1. Epub 2010 Oct 28.

PMID:
20981416
4.
5.

Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes.

Spitz F, Herkenne C, Morris MA, Duboule D.

Nat Genet. 2005 Aug;37(8):889-93. Epub 2005 Jul 3.

6.

Comparative analyses of vertebrate posterior HoxD clusters reveal atypical cluster architecture in the caecilian Typhlonectes natans.

Mannaert A, Amemiya CT, Bossuyt F.

BMC Genomics. 2010 Nov 24;11:658. doi: 10.1186/1471-2164-11-658.

7.

Developmental roles of pufferfish Hox clusters and genome evolution in ray-fin fish.

Amores A, Suzuki T, Yan YL, Pomeroy J, Singer A, Amemiya C, Postlethwait JH.

Genome Res. 2004 Jan;14(1):1-10.

8.

Elephant shark (Callorhinchus milii) provides insights into the evolution of Hox gene clusters in gnathostomes.

Ravi V, Lam K, Tay BH, Tay A, Brenner S, Venkatesh B.

Proc Natl Acad Sci U S A. 2009 Sep 22;106(38):16327-32. doi: 10.1073/pnas.0907914106. Epub 2009 Sep 3.

9.

Convergent evolution of complex regulatory landscapes and pleiotropy at Hox loci.

Lonfat N, Montavon T, Darbellay F, Gitto S, Duboule D.

Science. 2014 Nov 21;346(6212):1004-6. doi: 10.1126/science.1257493.

10.

Impact of copy number variations (CNVs) on long-range gene regulation at the HoxD locus.

Montavon T, Thevenet L, Duboule D.

Proc Natl Acad Sci U S A. 2012 Dec 11;109(50):20204-11. doi: 10.1073/pnas.1217659109. Epub 2012 Nov 7.

11.
12.

Diversification of four human HOX gene clusters by step-wise evolution rather than ancient whole-genome duplications.

Abbasi AA.

Dev Genes Evol. 2015 Nov;225(6):353-7. doi: 10.1007/s00427-015-0518-z. Epub 2015 Oct 19. Review.

PMID:
26481129
13.

Hox cluster characterization of Banna caecilian (Ichthyophis bannanicus) provides hints for slow evolution of its genome.

Wu R, Liu Q, Meng S, Zhang P, Liang D.

BMC Genomics. 2015 Jun 18;16:468. doi: 10.1186/s12864-015-1684-0.

14.

Evolution of Hox gene clusters in gnathostomes: insights from a survey of a shark (Scyliorhinus canicula) transcriptome.

Oulion S, Debiais-Thibaud M, d'Aubenton-Carafa Y, Thermes C, Da Silva C, Bernard-Samain S, Gavory F, Wincker P, Mazan S, Casane D.

Mol Biol Evol. 2010 Dec;27(12):2829-38. doi: 10.1093/molbev/msq172. Epub 2010 Jul 8.

PMID:
20616144
15.

Evolution of coding and non-coding genes in HOX clusters of a marsupial.

Yu H, Lindsay J, Feng ZP, Frankenberg S, Hu Y, Carone D, Shaw G, Pask AJ, O'Neill R, Papenfuss AT, Renfree MB.

BMC Genomics. 2012 Jun 18;13:251. doi: 10.1186/1471-2164-13-251.

16.
17.

The genetics of murine Hox loci: TAMERE, STRING, and PANTHERE to engineer chromosome variants.

Tschopp P, Duboule D.

Methods Mol Biol. 2014;1196:89-102. doi: 10.1007/978-1-4939-1242-1_6.

PMID:
25151159
18.

Hox clusters as models for vertebrate genome evolution.

Hoegg S, Meyer A.

Trends Genet. 2005 Aug;21(8):421-4. Review.

PMID:
15967537
19.
20.

Highly conserved syntenic blocks at the vertebrate Hox loci and conserved regulatory elements within and outside Hox gene clusters.

Lee AP, Koh EG, Tay A, Brenner S, Venkatesh B.

Proc Natl Acad Sci U S A. 2006 May 2;103(18):6994-9. Epub 2006 Apr 24.

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